Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_1455 |
Symbol | |
ID | 7091798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 1575648 |
End bp | 1576859 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643464794 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_002361780 |
Protein GI | 217977633 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATTT CTGGCGCTTC TGCTTGGCCC TTCGGCGTCG TCGGCGTGAT GGCTCTCGGC CTGGGCCTGG CCGGGTGTGA CGGGGCGACG CAGGCCGGCC CCTCGGGGCC GCCGCCGAAG CCGTCTGTCG AAGTCGTCAC CTTGCATGCC GAGCCGGTTA CCCTCACCAC GGATCTTCCG GGCCGGACCT CGCCTTTTCG AACGGCGGAG GTCAGGCCGC AGGTCAGCGG GGTCATCCTC AAGCGCTTGT TCGTCGAGGG CGACGTCGTG CAGGCGGGCC AGGAACTTTA TCAGATCGAC CCGGCGCCGT ATGAAGCGAG CCTCGCCAGC GCGCGGGCGT CGCTGTTGCA CGCGCAGGCG TCGGTGAGGA CTGCGCAATC GACCGTCGAC CGCCGTCGGC CCTTGACGGC GAAGAATATC GTCAGCCAGC AGGATCTGGA TAACGCGGTC GGGACGCTGC AGCAATTTCA GGCCGATGTC GCCTCCGCCG AGGCCGCGAT TAAAGCCGCC AAGATCAATC TCGCCTATAC GAAGGTCTTG TCGCCGATCA CCGGACGCGC CAGCCGGTCC TCGGTCACAG AAGGCGCCCT GGTCACGGCC AACCAAACGA CCGTGCTCGT CACCGTGACG CAGCTCGATC CTATCTACGT CGACGTCACG CAGCCGGCCA CCACGATCCT GCGGCTCAAG CGAGAGTTGG CAAGCGGGCA GATCAAAAGC GCGGGGAACG GCCAGGCGCC CGTCAAGCTG CTGCTGGACG ACGGCTCCAG CTACGATCAC GCGGGCGTCT TGCAATTCAG CGAAGTCACC GTCGATCAGG GGACAGGCGC CGTCATCGTG CGCGCGATCT TCCCAAATAA CGAGGGTCTG CTGCTGCCCG GCATGTTCGT TCGCGCCCAG CTGCAGGAGG GGATCCGGCA GAACGGAATC CTCGCGCCTC AGCAAGGGGT CACGCACAGC CAGAAAGGCG AGCCGACGGC GCTGATCGTC GACGCCGAGG GCAAGGTGCA AAGCCGGCTC CTGACGACGG ACCGCGCGAT CGGCGACGCG TGGCTGATCA CAAGCGGCCT CAACGATGGC GACAGGCTGA TCGTGAGCGG CGTGCAGATG GCCCGGCCCG GCATGCAGGT CACCGTCAAC GAGGCAAAGC TCAGCCACAA CAGCATGGCG TCCGCCGAGC CTTTGGCCGG CGCCAAGCCG GCCGCGCAGT AA
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Protein sequence | MNISGASAWP FGVVGVMALG LGLAGCDGAT QAGPSGPPPK PSVEVVTLHA EPVTLTTDLP GRTSPFRTAE VRPQVSGVIL KRLFVEGDVV QAGQELYQID PAPYEASLAS ARASLLHAQA SVRTAQSTVD RRRPLTAKNI VSQQDLDNAV GTLQQFQADV ASAEAAIKAA KINLAYTKVL SPITGRASRS SVTEGALVTA NQTTVLVTVT QLDPIYVDVT QPATTILRLK RELASGQIKS AGNGQAPVKL LLDDGSSYDH AGVLQFSEVT VDQGTGAVIV RAIFPNNEGL LLPGMFVRAQ LQEGIRQNGI LAPQQGVTHS QKGEPTALIV DAEGKVQSRL LTTDRAIGDA WLITSGLNDG DRLIVSGVQM ARPGMQVTVN EAKLSHNSMA SAEPLAGAKP AAQ
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