Gene Msil_1424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1424 
Symbol 
ID7091764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp1540440 
End bp1541786 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content67% 
IMG OID643464762 
Productsun protein 
Protein accessionYP_002361751 
Protein GI217977604 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.204434 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCGG AAGCGTCAAG GATCGAGGCC GAACGTCACC CGGGGCTGCC GGCCCGTCTT 
GCCGCCGCGG CCATCCTGAA TGATATCGTC GGCAAGGCGC ATTCTCTCGA AGATTGCTTT
TCCCCCGGCG CCATCCCCTC CCGGCTGCAG GGACTGGACC CGCGCGACGT CGCGCTGACG
CGCTCGATCG TCACCGCCGC GCTGCGACGG CTCGGCACCA TCCGGAAGAC GCTGGGCGAG
TTTCTCGACA AGGGGTTGCC GCGTCCGGTC GCACACCTCG AATGGACCCT TATCGCCGCC
GCGGCGCAGA TTCTCTTTCT GGATGTTCCA GATCATGCGG CCGTCGATCT TGCTGTTCGC
GCGACCCGGC TCGAAAATAA AAGCGCGCCC TTTGCCGGCG TGATCAACGC CGTTTTGCGC
AATATCGCGC GCGGCCGCGA CAAGATCCTC GAAGACAGCG ACCCGTTCGA TCATGATACG
CCGCCCTGGC TCGCCGCGCG CTGGCGCAAG ACCTATGGCG AGGATCTGGC CCGAAAGATC
GCCAGAGCCA ATCGCGACGA GCCGACGCTG GATCTCACCG TCAAATCCGA TCCCGCGCTC
TGGGCGGAGC GGCTTGGCGG CCTTGTTCTG CCGACCGGCT CCGTACGGCT TCTGACGCAT
GCGCCGATCG CCGAGCTTCC CGGCTTTGCG GAGGGCGAGT GGTGGGTGCA GGACGCGGCC
GCGGCCCTGC CGGCCCGGCT GATCGCTCCC GCTCCCGGCG CCCGCGTCGC GGATTTTTGC
GCGGCTCCCG GCGGCAAGGC CGCTCAGCTC GCCGCCGCCG GCGCCAAGGT CACGGCGATC
GACCGGTCGG CGGAGCGCCT GAAACGGCTC GCCGCCAATT TCTCGCGGCT TGATCTTCAT
GCCGATGTCG TCGTCGCCGA TATCGTCGGC CTCAAGGCGC AGCCCTTCGA CGCCATCCTG
ATCGACGCGC CCTGCCTCGC TACGGGAACC ATCCGCCGCC ATCCCGATAT CGCCTGGATC
AAGAAGCCGA CGGACATCGC TTCCCTCGCG CAGGTTCAGG CGCGCATGCT GGACAAGGCG
GTCGAACTGG TCCGCCCGGG CGGCGTGATC GTCTATTGCA CCTGCTCGCT TGAGCCGGAG
GAGGGCGAAC TCCAGATCGC GGCGCTGCTT CGCCGCAATC CGGACATGCT GCGCTCTAAA
ATTTCCCCGC ATGAGGTCGG CGACGTCGAG GGCGTCATCA ACAATGAAGG CGAGCTTCGC
ACCTTGCCTT GCCATCTTCC CGCTGACGAT CCACGGCTTT CGGGCCTCGA CGGCTTTTTC
GCGGCCCGGT TGATCCGGCG TAGTTAA
 
Protein sequence
MSAEASRIEA ERHPGLPARL AAAAILNDIV GKAHSLEDCF SPGAIPSRLQ GLDPRDVALT 
RSIVTAALRR LGTIRKTLGE FLDKGLPRPV AHLEWTLIAA AAQILFLDVP DHAAVDLAVR
ATRLENKSAP FAGVINAVLR NIARGRDKIL EDSDPFDHDT PPWLAARWRK TYGEDLARKI
ARANRDEPTL DLTVKSDPAL WAERLGGLVL PTGSVRLLTH APIAELPGFA EGEWWVQDAA
AALPARLIAP APGARVADFC AAPGGKAAQL AAAGAKVTAI DRSAERLKRL AANFSRLDLH
ADVVVADIVG LKAQPFDAIL IDAPCLATGT IRRHPDIAWI KKPTDIASLA QVQARMLDKA
VELVRPGGVI VYCTCSLEPE EGELQIAALL RRNPDMLRSK ISPHEVGDVE GVINNEGELR
TLPCHLPADD PRLSGLDGFF AARLIRRS