Gene Msil_1417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1417 
Symbol 
ID7091757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand+ 
Start bp1532999 
End bp1533625 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content65% 
IMG OID643464755 
Productthiamine-phosphate pyrophosphorylase 
Protein accessionYP_002361744 
Protein GI217977597 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCG ACAGTTCCGA CTGGATCGCC CGCCTCCTGC CCTACGGCGT CAAACTGGTG 
CAGCTACGCG CCAAAGACCT CTCCGACGAG GTTTTGCGCA AAGAGATCAT AAGGGCCAGG 
AGCTTATGCG AGGCTGGCGG CGCGCAGCTC GTCGTCAATG ACTACTGGCG TCATGCCATC 
GACCTTGGCT GCGATTTCAT TCACCTCGGC CAGGAAGATC TCGAAACCGC CGATCTGAAA 
GCGATCCGCC AGGCCGGCCT GAAACTCGGC GTCTCGACGC ATGACGAGGC CGAGCTTGCG 
CGGGCGCTCG AAACCGGGCC GGACTATATC GCGCTCGGCC CGATCTATCC GACGATCTTG 
AAGAAAATGC CCTTTGCGCC GCAAGGCCTC GCGCGCATCG GCGAATGGAA AAAGCGCATT 
GGCACAATCC CCCTTGTCGC CATCGGCGGG ATTACGCTGG AGCGCGCGCC GGGCGTGCTC 
GAGGCCGGGG CCGACAGCGC GGCAGTCGTG ACCGACATCA CGCTGAACGC CGACCCGGAG 
GCGCGGGCGC GGGCGTGGGC CGCGATGGCG GGCGGAGCGC TCCGCGCGAC CGACGACAGC 
GCAGCATCTG CGGGCTTCCC GGATTGA
 
Protein sequence
MIVDSSDWIA RLLPYGVKLV QLRAKDLSDE VLRKEIIRAR SLCEAGGAQL VVNDYWRHAI 
DLGCDFIHLG QEDLETADLK AIRQAGLKLG VSTHDEAELA RALETGPDYI ALGPIYPTIL 
KKMPFAPQGL ARIGEWKKRI GTIPLVAIGG ITLERAPGVL EAGADSAAVV TDITLNADPE 
ARARAWAAMA GGALRATDDS AASAGFPD