Gene Msil_1400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1400 
Symbol 
ID7091738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp1513548 
End bp1513970 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content59% 
IMG OID643464738 
ProductPilT protein domain protein 
Protein accessionYP_002361727 
Protein GI217977580 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.310156 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACAT TTCTGCTCGA CACCAACATC CTCTCCGAGC TGCGGCGCCC GAAGCCAGAA 
CCCAAGGTGG TGTCCTTTAT TGCCGCGCAG CCGCTCGAAA ATCTTTACGT CAGCACAGTG
ACCTTCGCAG AAATCCGCTT TGGCATCGAG CTTGTCGCGG ACGTCGGTCG GCGTTCGGCG
CTCAATACAT GGTTGGAGCA AAACCTGCGG CCGATGTTCG ACCAGCGAGT CCTGCCGGTT
ACCGAAGACG TCATGTTCAA ATGGCGCCTT CTGGTGGAGG AAGGACGCAA GGCGAGACAT
ACATTTTCGC AACCGGACCT CATCATCGCG GCGACAGCCC TTTGCCACGG CCTCACAATT
CTCTCCCGTG ATACGAGCGA CTATGAGCGC GCCGGCGCTC CCGTCGTTGA TCCGTGGCGA
TAG
 
Protein sequence
MTTFLLDTNI LSELRRPKPE PKVVSFIAAQ PLENLYVSTV TFAEIRFGIE LVADVGRRSA 
LNTWLEQNLR PMFDQRVLPV TEDVMFKWRL LVEEGRKARH TFSQPDLIIA ATALCHGLTI
LSRDTSDYER AGAPVVDPWR