| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1397 |
|---|
| Symbol | |
|---|
| ID | 7091735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 1511150 |
|---|
| End bp | 1512259 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643464735 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002361724 |
|---|
| Protein GI | 217977577 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.659828 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGAT CTATTCTGCC TTCCCTGTCG GGCGCCAATT TCTGGCAGCG GATTCCCGCG
AGCGCCATGC TGCTCATCTT GATCGCGCTC GCCTGTATTT TCGGCCCTTT ATTCACGCCG
CATCCATTCG ATCGCGTCTA TCCGGATTAT GTGCTGGCGC CTCCCTCGCT GGAGCCGCGT
CCGAACGCGG AAGAAACGCG CGAGGCGGTC GAGGAGCTCG CCGCGCGGCT CGGCGCCAAA
ATAGTGTCGT TTGAACCAAC AGGCGACAAC GTCATCGCAA AATTCTCAAG CGACCGGACC
ATTGACGCGG CGGCTCTCGC GGCGCTGCCG CGCTCGGACA GGATTGGACC GCCGCGCCTC
GTCTCCAGCG GCCACGACGA CCAAAAAATC AGCCTCTCCA TTCCCTTGCT GCGAACAATG
TTTCCTTTTG GCGCCGACGC CAATGGCCGC GACCTCTTGA CCCGGACATT GATCGCGGGG
CGCGTCTCCC TCGCGGTTGG CTTGCTCGCC TCGCTGGTGG CGCTCGTCAT CGGCGTTCTC
TATGGCGCGA TTGCCGGCTA TGCCGGCGGG GCCGTCGACG CTTTGATGAC GCGCATCGTC
GAAATCATCT ACGCGCTGCC CTTCATCTTT TTCGTCATCG TGCTTGTGAT GGTGTTCGGG
CGGCATTTCG TGCTGATCTT CATCGCCATC GGCGCGGTCG AATGGCTCGA CATGGCGCGC
ATCGCGCGAG GACAGACGCT CGCCATCAAG GAGAAGGATT ATGTCGCCGC CGCGCGCGCC
TTGGGGGCGA GCCCTGCCGC GATCATCCGG CGCCATATTC TGCCCAATGC GAGCGGCCCG
ATCATCGCCT ATCTGACGCT GCTTCTGCCG CGCGTCATAT TGCTCGAAAG CTTCATTTCC
TTCCTCGGTC TCGGCGTGCA GGAGCCTCTG GCGAGCTGGG GCGTATTGAT CGCCGACGGC
GCCCGCAACA TTCAGGGCGC GCTCCACCTA CTCTTTTTTC CGGCGCTGTT TCTCGGCGCA
ACGCTCGGCG CCTTGCAGAG TTTTGGCCAA TATCTCCAGG CGATCTTTAC CGACGCGGCC
GGCTTCGGCG AGGAGAGCGA GCCGCGATGA
|
|---|
| Protein sequence | MSRSILPSLS GANFWQRIPA SAMLLILIAL ACIFGPLFTP HPFDRVYPDY VLAPPSLEPR
PNAEETREAV EELAARLGAK IVSFEPTGDN VIAKFSSDRT IDAAALAALP RSDRIGPPRL
VSSGHDDQKI SLSIPLLRTM FPFGADANGR DLLTRTLIAG RVSLAVGLLA SLVALVIGVL
YGAIAGYAGG AVDALMTRIV EIIYALPFIF FVIVLVMVFG RHFVLIFIAI GAVEWLDMAR
IARGQTLAIK EKDYVAAARA LGASPAAIIR RHILPNASGP IIAYLTLLLP RVILLESFIS
FLGLGVQEPL ASWGVLIADG ARNIQGALHL LFFPALFLGA TLGALQSFGQ YLQAIFTDAA
GFGEESEPR
|
|---|
| |