| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1391 |
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| Symbol | |
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| ID | 7091729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 1502422 |
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| End bp | 1505463 |
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| Gene Length | 3042 bp |
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| Protein Length | 1013 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643464729 |
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| Product | DNA polymerase I |
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| Protein accession | YP_002361718 |
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| Protein GI | 217977571 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.413806 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACCC CAGCCTCCCA AACGCCTGTC CAGTCCGGCG ACCACGTCTT TCTCGTCGAC
GGGTCGTCTT TCGTGTTCCG CGCCTATTTC CAGTCGATCC GGCAGGACGC CAAATATAAT
TACCGCTCCG ACGGCCTGCC GACGGGGGCG GTGCGGCTGT TCTGCACCAA AATCTTCCAG
TTCGTGCGCG AGGGCGCGGC CGGCGTGAAG CCGACCCATC TCGCCATTAT TTTCGATAAA
TCCGAGAATT CGTTCCGGAA GGAAATCTAC CCGCCCTACA AGGGCAACCG TTCCGAGCCG
CCTGAGGATC TGATCCCGCA GTTTCCGCTT ATGCGCGCCG CGGTGCGCGC GTTCGGCCTC
CTTCCCGTCG AGCAGGACCG CTATGAGGCC GACGATCTCA TCGCCACCTA TGCGCGGCAA
GCGCGCGAGC GCGGCGCCGA CGTCACGATT ATCTCGGCCG ACAAGGATCT GATGCAGCTG
ATCGGGCCCG GCGTCTCGAT GTATGATCCA GCGTCCGGCG AGGCCGGCGC GAAAGGCTCG
CGAGAGGAGC GCCGCATTGG CGTCGACGAG GTTTTGGCTT ATTTCGGCGT GCCGCCCGAA
AAAGTCGTCG ACGTGCAAGC GCTGGCCGGC GATTCGACCG ATAATGTGCC CGGGGCGCGC
GGCATCGGCC TCAAAACCGC CGCGCAGCTT ATCGGCGAAT ATGGCGATCT CGACACGCTG
CTGGCGCGCG CCGGCGAGAT CAAGCAGCCG AAGCGGCGCG AGATTCTGAC CGACGCGGAT
AGCGTCGCGC TGATCCGCAC ATCGCGAAAG CTCGTGGAGC TCGTCTGCGA CGTCGAGGTC
GAAACGCCGC TGGACGATCT GCGCCTCGCC GCGCCGGAGG GCAAGACCCT CGTCGCCTTC
TGCAAGGCGC TTGAATTTAC AACGCTCACC AGGCGTGTGG CCGAGGCTTG CGCCGTCGAG
CCGGCGCTGA TCGAGCCGGA CCCGGATTTC GCCGGCGAAG CCGGATGGCG CGGCCGCAAC
GGGGCGCCCC CGCCCGTTTC CACCGCGGCC GAAACGCCAT CCGCCGAAAA TCTGCCGCAA
GGGCCGAAGC GCAATGCGCG CTATGGCGCC GAGGCGCCGC AACAGACCAT CGCGACGGGC
CCCGGCGAAC TTGCCGCTGC GCGGGCGGCG CAAGCGCGTG CGGAAAAATT CGATCTCGGG
GCGTATGAGA CGATTGTGAG CTTCGAGCGG CTCGAGGCCT ATATCGCGGA AGCGATCGAA
TCCGGCATTA TCGCGATCGA CACGGAAACC TCCTCGCTCG ATCCGATGCA GGCCGAGCTC
GTCGGCCTGT CGCTTTGCCT CGCCCCCGGC CGCGCCGCCT ATGTTCCGCT GCGCCACCGA
GGCGAGGGCG CGGGCGATCT CTTTGGCGGC GCTGATCTCG TCCCCGGCCA GCTCGACTCC
GACGAAACGC TGGCGCGGCT GAAGCCGATG CTGGAGGCGC CGGACGTTCT CAAAATCGCG
CAGAACGCCA AATTCGACCA GCTTGTACTG GCGCAGCGCG GCATAAGGCT CGCTCCCGTC
GACGACACGC TGCTGCTGTC TTATGTGCTC GACGCCGGCC GCACCGATCA CGGCATGGAC
GTGCTCGCCG AAAAATACTT CGGCCATAGA CCGATTCAGT TCGGCGCCGT CGCAGGCTCG
GGCCGGACGT TCATCGGCTT CGCCCGCGTC GCGCTCGACA AGGCGACGGA ATATTCCGCC
GAAGACGCCG ACGTCACCTT GCGGCTCTGG CGGGTTTTGA AGCCGCGCCT TGCGGCCGAG
CGCATGAGCG CCGTCTATGA GACGCTGGAG CGGCCGATGG TCGAAACTCT CGCGCGCATG
GAGCGGCGCG GCGTCTCGAT CGACCGGGCG ATTTTATCGA GGCTCTCCGG CGAATTCGCA
CAGGATATGG CGCGGCTGGA GGCGGTTATT TTCGAGCTCG CCGGCGAAAG CTTCAATCTC
GGCTCGCCGA AGCAATTGGG CGACATATTA TTCGGCAAGA TGGGCCTTGC GGGAGCGCGC
AAAACCGCGA CCGGCGCCTG GTCGACGGCG GCCGGCGTGC TGGACGACCT CGCCGAACAG
GGCGTCCCGC TCGCCGCCCG CATTCTCGAC TGGCGCCAGC TGTCGAAACT GAAATCGACC
TACACCGACG CCCTGCCCTC CTATGTCAAT CCTGAGACCG GCCGCGTGCA TACCTCCTAT
GCGCTCGCGG CGACGACAAC AGGACGGTTG TCCTCGTCGG AGCCCAATCT GCAGAATATT
CCCGTGCGCA ACGAGGCGGG GCGAAAGATC CGCAAGGCTT TTATTGCGCC GCCCGGCAGG
AAGCTGATCT CGGCCGACTA CAGCCAGATT GAATTGCGCC TGCTTGCTCA TATTGCCGAC
ATTTCGCAAC TGAGAGCCGC CTTTGCCGAG AACCTCGACA TTCACGCGAT GACAGCGTCC
GAGATGTTCG GCGTGCCGGT CGAGGGCATG CCGCCCGAGG TGCGCCGCCG CGCCAAGGCG
ATCAATTTCG GCATCATCTA TGGCATTTCA GCATTCGGCC TCGCCAACCA GCTGGCCATT
CCGCGCGAGG AGGCCGGCGC CTATATCAAG CGCTATTTCG AGCGCTTTCC GGGCATCCGC
GCCTACATGG ACGCAACCAA ACAATTTGCG CGCGAGAATG GCTATGTGAC AACCATTTTT
GGCCGCAAAT GCCACTATCC GCGCATCACC GCCTCAAACC CATCGGAACG CGCCTTTAAC
GAACGCGCCG CCATCAACGC GCCGATCCAG GGCTCGGCGG CGGACATCAT CCGGCGCGCG
ATGGTCCGCA TGGACGAGGC TTTGGAAAAA GCGGGCTTGA GCGCGCAGAT GTTGTTGCAG
GTGCATGACG AGCTTGTGTT TGAAGCGCCG GACGAGGAGA TCGACGCCAC GATCGATGTG
GTGCGCAAGG TGATGGTCGA CGCGCCGCAT CCGTTCCTGC AACTCGCCGT GCCGCTGCAA
GTCGACGCCA AGGCGGCGCA GAACTGGGAC GAGGCGCATT AG
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| Protein sequence | MPTPASQTPV QSGDHVFLVD GSSFVFRAYF QSIRQDAKYN YRSDGLPTGA VRLFCTKIFQ
FVREGAAGVK PTHLAIIFDK SENSFRKEIY PPYKGNRSEP PEDLIPQFPL MRAAVRAFGL
LPVEQDRYEA DDLIATYARQ ARERGADVTI ISADKDLMQL IGPGVSMYDP ASGEAGAKGS
REERRIGVDE VLAYFGVPPE KVVDVQALAG DSTDNVPGAR GIGLKTAAQL IGEYGDLDTL
LARAGEIKQP KRREILTDAD SVALIRTSRK LVELVCDVEV ETPLDDLRLA APEGKTLVAF
CKALEFTTLT RRVAEACAVE PALIEPDPDF AGEAGWRGRN GAPPPVSTAA ETPSAENLPQ
GPKRNARYGA EAPQQTIATG PGELAAARAA QARAEKFDLG AYETIVSFER LEAYIAEAIE
SGIIAIDTET SSLDPMQAEL VGLSLCLAPG RAAYVPLRHR GEGAGDLFGG ADLVPGQLDS
DETLARLKPM LEAPDVLKIA QNAKFDQLVL AQRGIRLAPV DDTLLLSYVL DAGRTDHGMD
VLAEKYFGHR PIQFGAVAGS GRTFIGFARV ALDKATEYSA EDADVTLRLW RVLKPRLAAE
RMSAVYETLE RPMVETLARM ERRGVSIDRA ILSRLSGEFA QDMARLEAVI FELAGESFNL
GSPKQLGDIL FGKMGLAGAR KTATGAWSTA AGVLDDLAEQ GVPLAARILD WRQLSKLKST
YTDALPSYVN PETGRVHTSY ALAATTTGRL SSSEPNLQNI PVRNEAGRKI RKAFIAPPGR
KLISADYSQI ELRLLAHIAD ISQLRAAFAE NLDIHAMTAS EMFGVPVEGM PPEVRRRAKA
INFGIIYGIS AFGLANQLAI PREEAGAYIK RYFERFPGIR AYMDATKQFA RENGYVTTIF
GRKCHYPRIT ASNPSERAFN ERAAINAPIQ GSAADIIRRA MVRMDEALEK AGLSAQMLLQ
VHDELVFEAP DEEIDATIDV VRKVMVDAPH PFLQLAVPLQ VDAKAAQNWD EAH
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