Gene Msil_1325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1325 
Symbol 
ID7091335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp1423900 
End bp1426065 
Gene Length2166 bp 
Protein Length721 aa 
Translation table11 
GC content64% 
IMG OID643464663 
Productmalate synthase G 
Protein accessionYP_002361652 
Protein GI217977505 
COG category[C] Energy production and conversion 
COG ID[COG2225] Malate synthase 
TIGRFAM ID[TIGR01345] malate synthase G 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTACG CGCAGATCGG ACCGATAAGC GTCGACACGG CTTTGCGGGA TTTCGTCGAG 
ACCGACGTGC TGCCGGGGAC AGGCGTCAAG GCGGACCAGT TCTGGACCGG CCTTGCCGGG
CTGATCGAGG ATTTCGCTCC GCGCATCCGG GCGCAATTGC GCTTCCGCGA CGAGCTTCAA
TCCAAGATCG ACGCCTATCA CAAAATCTAC GCCGCAAGAT CTTTCGACAT GGCCGGCTAT
GAGGCGTTCC TGCGCGAGAT CGGCTACATT GTCCCCGAGC CGCCGGATTT TGCCATCCGC
ACCGAAAATA CGCGCGAGGT CGCGCGCGTC TCGGGTCCTC AGCTTGTCGT TCCCGCCTCG
AATGCGCGCT TTGTTCTCAA CGCGGCCAAC GCCCGCTGGG GCAGCCTGTT CGACGCGCTC
TACGGCTCCG ACGTCATACC GGAAACGCCA GGCGCCGAAC GCGGCAAGGG CTACAACAAG
GCGCGCGGCG CGCGCGTCAT TGAATATGCG CGCAACCTGC TCGACGAGCT GGTCCCGCTG
TCCAAGGGCA GCCACAAGGA CGTCATCAGC TACAAGGTCG CCAACGGCGA ACTCGTCGCC
GAACTCGACA ATGGGCTTGA GACGCGGCTG AAGCATCCTG GCCGTTTCGC CGGCTGGCGG
AGGACTGGCC CCGGCTCCTT TGTCGTGCTG CTGCGCCAGC ACGGCCTGCA CATCGAACTC
GACATTGATC CCGTCAGCCT TGTCGGCTCG GAAAGCAAAT CCGGCCTCGC CGACGTCATT
CTCGAAGCGG CGCTCAGCGC CATCGTCGAC CTTGAGGACA GCGTCGCCGC GGTCGACGCG
CAGGACAAGG TCGACGTCTA TCGCAACTGG CTCGGCCTGA TGAAGGGCGA ACTGTCGGCG
ACGCTCGAGA AGAAGGGCCT GTTGATCGAA CGGCGGCTCA ATCCCGACCG CGTCTATACC
GATCGCGACG GCGCCCCCAT GGCCCTGCAC GGACGCAGCC TGCTTCTCGT GCGTAATGTC
GGTCATCATG TGCGCACCGA CGCCGTGCTC GATGCGGACG GTCATGAGGT TCCCGAGACC
ATCGTCGACG CCGCCGTCAC CGCGCTGATC GGCATGCATG ACGTCAAGGG CGCGGGTCCG
ATCCACAACA GCCGCAGCGG CTCGATCTAC ATCGTCAAAC CCAAGATGCA CGGGCCGGAT
GAAGTGGCTC TCGCCAATGA TCTGTTCGGC CGGGTCGAGG ATATGCTGGG CCTCGATCGC
TTCACGCTCA AAATGGGCAT CATGGATGAG GAGCGGCGCA CCACGGTCAA TCTGAAGGCC
TGCATTTTTG CCGCCGCCGA CCGAGTGTTC TTCATCAATA CCGGCTTCCT CGATCGCACC
GGCGACGAGA TCCACACCTC GATGGAGGCG GGTCCGATGA TCCGCAAGGA TGAGATCAAG
GGGACGCCCT GGATCGCGGC CTATGAAAAC AACAATGTGG ATATCGGGCT CGCCTGCGGA
TTGCCGGGCC GAGCGCAGAT CGGCAAGGGC ATGTGGGCTG CGCCCGACAA CATGGCCGAA
ATGGTCGCCA AGAAAATCGC CCATCCGCTG TCGGGCGCCA ACACCGCCTG GGTGCCTTCG
CCGACCGCGG CGACGCTGCA TGCGCTGCAT TACCATCGCG TCGACGTCGC CATGCGTCAG
GCCGAGCTGC GCAAGCGCCC GCGCGCCAAG CTCACCGATA TTCTGACGAT CCCGCTGGCC
AAGACCAATT GGGCGCCGGA CGACATCAAG CAGGAGATCG AAAACAACTG CCAGGGCATT
TTGGGCTATG TCGTGCGCTG GGTCGATCAG GGCATCGGCT GCTCCAAGGT GCCGGACGTC
CATGACGTCG CCCTGATGGA GGATCGCGCG ACGCTGCGGA TCTCGAGCCA GCACATCGCC
AACTGGCTGC GCCATGACAT CGTGACGAAA GAGCAGGTGC TGGCCGCGTT GAAAACCATG
GCCGTCGTCG TCGACCGGCA GAATGCGGGC GATCCGCTGT ATGGGCCGAT GGCGCCGAAT
TTCGACGGGC CGGCGTTTAA GGCGGCGCTC GATCTCATCT TCAAGGGCCG CGAGGAGCCG
AACGGCTACA CGGAAGGGTT GCTCGCCTCC TGGCGGCGCG AAGCGAAAGC TATGCAGGCG
TCCTGA
 
Protein sequence
MAYAQIGPIS VDTALRDFVE TDVLPGTGVK ADQFWTGLAG LIEDFAPRIR AQLRFRDELQ 
SKIDAYHKIY AARSFDMAGY EAFLREIGYI VPEPPDFAIR TENTREVARV SGPQLVVPAS
NARFVLNAAN ARWGSLFDAL YGSDVIPETP GAERGKGYNK ARGARVIEYA RNLLDELVPL
SKGSHKDVIS YKVANGELVA ELDNGLETRL KHPGRFAGWR RTGPGSFVVL LRQHGLHIEL
DIDPVSLVGS ESKSGLADVI LEAALSAIVD LEDSVAAVDA QDKVDVYRNW LGLMKGELSA
TLEKKGLLIE RRLNPDRVYT DRDGAPMALH GRSLLLVRNV GHHVRTDAVL DADGHEVPET
IVDAAVTALI GMHDVKGAGP IHNSRSGSIY IVKPKMHGPD EVALANDLFG RVEDMLGLDR
FTLKMGIMDE ERRTTVNLKA CIFAAADRVF FINTGFLDRT GDEIHTSMEA GPMIRKDEIK
GTPWIAAYEN NNVDIGLACG LPGRAQIGKG MWAAPDNMAE MVAKKIAHPL SGANTAWVPS
PTAATLHALH YHRVDVAMRQ AELRKRPRAK LTDILTIPLA KTNWAPDDIK QEIENNCQGI
LGYVVRWVDQ GIGCSKVPDV HDVALMEDRA TLRISSQHIA NWLRHDIVTK EQVLAALKTM
AVVVDRQNAG DPLYGPMAPN FDGPAFKAAL DLIFKGREEP NGYTEGLLAS WRREAKAMQA
S