| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1308 |
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| Symbol | |
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| ID | 7091318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 1407826 |
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| End bp | 1408869 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643464646 |
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| Product | histone deacetylase superfamily |
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| Protein accession | YP_002361635 |
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| Protein GI | 217977488 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAAA GGCGCTCATT CCTGAAACTT TGCCTCGCCA GCGCGATGAC GCAGACCGAG
CTTTTGTCGG GTTCGGCCGC CGCCGCAGGC GGCGCGTTGC AAACGCTGCT CGTGACCCAC
CCCGGCTTTT TCGATCACGA TCCCGGACCC GGCCATCCCG AGCGGCCGGC GCGGCTCCGG
GCGATCGACG CCGCGCTGAA GGATCCGGTG TTTTCCACGC TCCGGCGCGA GGACGCGCCG
CTGCGCGACG ACATTGAGAC CGCAATCCTG CGCGCCCATA GCGCCTCCCA TCTCGCCCGT
TTCAAGGCAG CCGCGACCGA CGCCGAGAAT TTGCCCTATT CCTTCGACGG CGATACGGCG
ATCTCCGCGG GCTCGTTCGA GGCGGCCTAT CGCGCAGTCG GCGCCGGGCT CCTCGCGGTC
GATCGCGTCA TGGACCCGCA ATCGCGCGTC GCCAACGCGT TCTGCGAGGT GCGCCCGCCC
GGCCACCACG CCGAACGCAA CCGGATCATG GGCTTTTGCC TGTTCAATAA TATCGCGATC
GCCGCGCTTT ATGCGCAGAC GCGGCATGGA GCAGAGCGCG TCGCGATCAT TGATTTCGAC
GTGCATCACG GCAATGGCAC GCAGCAGATT TTCTGGGACC ACAAAGACGT CCTGTTCGCC
TCGACGCATC AGGCGCCGCT GTTTCCTTAT ACCGGCGCCC TCACGGATAC CGGCGCGGGC
AACATCTTCA ACGCGCCGCT GCGGGCCGGC GACGGCGGAC CCGTTTTCGC GGAAGCGATG
ACGACGCGCA TTCTTCCCGC GCTCGACACT TTCCGGCCGG ATCTGATCCT GATCTCGGCC
GGCTTCGACG CGCATTTCAA CGATCCCCTC GCCGATTTGC GCCTTAGCGA GGCGGACTTC
TCCTGGATCA CGCTGAAGCT GGTCGAGGCG GCGCAAAAAC ATTGCGGCGG CCGGATCGTC
TCCTTCCTCG AAGGCGGATA TGCGCTTGAC GCGCTGGCGC GTTCGACGGC CGCCCATGTC
GGCGCGTTGA TGCAGGGCGT CTGA
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| Protein sequence | MIERRSFLKL CLASAMTQTE LLSGSAAAAG GALQTLLVTH PGFFDHDPGP GHPERPARLR
AIDAALKDPV FSTLRREDAP LRDDIETAIL RAHSASHLAR FKAAATDAEN LPYSFDGDTA
ISAGSFEAAY RAVGAGLLAV DRVMDPQSRV ANAFCEVRPP GHHAERNRIM GFCLFNNIAI
AALYAQTRHG AERVAIIDFD VHHGNGTQQI FWDHKDVLFA STHQAPLFPY TGALTDTGAG
NIFNAPLRAG DGGPVFAEAM TTRILPALDT FRPDLILISA GFDAHFNDPL ADLRLSEADF
SWITLKLVEA AQKHCGGRIV SFLEGGYALD ALARSTAAHV GALMQGV
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