Gene Msil_1290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1290 
Symbol 
ID7091299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp1387503 
End bp1388432 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content65% 
IMG OID643464630 
ProductIntegrase catalytic region 
Protein accessionYP_002361620 
Protein GI217977473 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACAAGG TCAAAGCCGA GCTGAGAGTG TCGGAGCGTC GCGCCTGCGC GGCGCTCCGG 
CAGCCCCGCT CCACACAGCG CAAGCCAGCC CGCGGCCGCG ATGACGAGGC GGCTCTGACC
GCCGACATCG TCGAGCTGGC CAAGGCTTAT GGCCGCTACG GCTATCGGCG GATCACGGCT
TTGCTGCGCC ATGCTGGCTG GGTCGTGAAC GCCAAGCGGG TGCAGCGGAT CTGGCGCGCA
GACAAGTTCA CGCAGTCTGC GCAACAGCGC GACTGCGAGG GGCTGAAAGT CCCACAGAAA
CACCCAAAAC GCGGCAGGCT CTGGCTGAAC GACGGCTCTT GCGTGCGCCC GCGCGCCGAG
CGGCCCAACC ATGTCTGGTC CTATGACTTC GTCGCGGATC GGACCCAAGA TGGACGGAAG
TTCCGTATGC TCTGTTTGAT CGACGAGTTC ACCCGCGAGG CCCTGGCCAT CCAGGTCAAA
CGCCGGCTCA ACGCCACCGA CGTGCTGGAG ACCTTGGCCG ATCTGATGAT CCTGCGCGGA
ACGCCAGCCT ATGTTCGGTC GGACAATGGC CCGGAGTTCA TCGCCGTGGC CCTGCGCGAA
TGGATCGCCG CCGTCGGTTC AAAGACGGCC TATATCGAGC CCGGCAGCCC GTGGGAGAAT
GGCGCCTGCG AGAGCTTCAA TTCGAATCTC CGCGACGAGC TGCTCAATGG TGAGCTGTTC
TTCAGCCCAG CCGAGGCTCA GGCGATGATC GAGGCCTGGC GGCGGCATTT CAACGCCGTG
CGCCCACACA GCTCGCTCGG TTACCGATCG CCAGCGCCCG AGACAATTAT TCCCTGCGGC
GGAAACATCG CGCCATGGGC GAGCGCGCCA GCTGTGGGAG CCGCGCGCCC GCCCACACCA
ACCATGGCGT CAGAGCCTGC CATGCACTAA
 
Protein sequence
MDKVKAELRV SERRACAALR QPRSTQRKPA RGRDDEAALT ADIVELAKAY GRYGYRRITA 
LLRHAGWVVN AKRVQRIWRA DKFTQSAQQR DCEGLKVPQK HPKRGRLWLN DGSCVRPRAE
RPNHVWSYDF VADRTQDGRK FRMLCLIDEF TREALAIQVK RRLNATDVLE TLADLMILRG
TPAYVRSDNG PEFIAVALRE WIAAVGSKTA YIEPGSPWEN GACESFNSNL RDELLNGELF
FSPAEAQAMI EAWRRHFNAV RPHSSLGYRS PAPETIIPCG GNIAPWASAP AVGAARPPTP
TMASEPAMH