Gene Msil_1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1287 
Symbol 
ID7091296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand+ 
Start bp1384810 
End bp1385421 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content61% 
IMG OID643464627 
Productintegrase family protein 
Protein accessionYP_002361617 
Protein GI217977470 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACGCT CAGAATATGA CCCGAGTGCC CAAGAGCGGC GCCCATGGAA CGCGGGCCGG 
AAGCTTGGCG CCAAACGCGC GCTGAGGCCG CAGCAGGTTT GGGTCATCCG GTTCTGGCTG 
GATCGAGAGC GGCGACTTCG CGACCGTGCG ATGTTCGATC TCGCGATCGA CAGCAAGCTG 
CGGGGATGCG ACGTCGTCAA GGTCAAGATC AGCGATCTCG TCAGCGGTGG CCGGGTTCGC 
TCGTGCGCGA TCGTCATTCA GCAGAAGACC GGCCGACCCG TTCAGTTCGA GCTCCTCGAA 
CCCGCTCGAG GCAGTATTCT GGCATCGCTC GAGGATTTTG TCTTTCCGAG CCGGGTCGAT 
CATACGGATC ACATCAGCAC GCGGCAATAT GCTCGACTCG TCGACGAATG GGTAACCGGA 
ATCGGATTGC GCCCGGAGGA CTACGGCCCT TATTCGCTGC GTCGAACCAA GGCGTCGATC 
GTTTACAAGC AGACGGGCAA TTTGCGGGCC GTGCAGATCT TGCTCGGCCA TACGAAGATC 
GAAAGCACCG TTCGGTACCT CGGCGTTGAC GTAGAGGATG CGCTCGCCCT CGCAGAGGGC 
ACGGAGGTAT AG
 
Protein sequence
MGRSEYDPSA QERRPWNAGR KLGAKRALRP QQVWVIRFWL DRERRLRDRA MFDLAIDSKL 
RGCDVVKVKI SDLVSGGRVR SCAIVIQQKT GRPVQFELLE PARGSILASL EDFVFPSRVD 
HTDHISTRQY ARLVDEWVTG IGLRPEDYGP YSLRRTKASI VYKQTGNLRA VQILLGHTKI 
ESTVRYLGVD VEDALALAEG TEV