Gene Msil_1233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1233 
Symbol 
ID7092306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp1316756 
End bp1317973 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content68% 
IMG OID643464574 
Productlytic murein transglycosylase 
Protein accessionYP_002361564 
Protein GI217977417 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID[TIGR02283] lytic murein transglycosylase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.0329877 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTGC CGGCCCACCG CGCCGCATCT CGGCGATCGT TGTTTTCGCT TCGGTTTGCG 
CTGGGGCTCG TGTGCGCCGG CGCGACTCCC TCGCAGGCGG CCTCGCTGCA GGAATGCCTC
GCCGGCCTGC GGCCGGGGAT TCTCTCCAGC GGCGTCAGCG CCGCGACCTT CGACAAGGCG
ACGGCCGGGC TGCAGGCCGA CCCCGATATT TTCGCCCTGG CGCAGGCGCA ACCGGAATTC
AAGACGCCGA TCTGGGATTA TCTTGCCGGC CTCGTCGACG ACGAGCGGGT CGAGGACGGG
CGCGCGCAAA TGCGCAAATG GGCGCAGCCG CTGTCCGCCG CGCAGTCGCG CTATGGCGTC
GACGCCGCGA CGATCGTCGC GGTGTGGGGC GTCGAGTCCG ATTTCGGCCG CAGCTTTGGC
AAACGGCCGA TCATCCAGTC GCTTGCGACG CTGTCCTGCG GCCCCTATCG CGCCGCCTAT
TTCCGCACGG AGCTGACGGC GGCGTTCAAG ATCCTCGATC ATGGCGACAT CGTCCCGGAG
CAATTCGTCG GCTCCTGGGC GGGCGCCTTC GGCCACACCC AATTCATGCC CTCGACCTTC
CTGCGCACAG CCGTCGATTT TGATGGCGAC GGACGCAGGG ATCTCATCAA CTCGGTTCCC
GACGCGCTCG GCTCGACCGC GGCCTATCTG CGCAAGGGCG GCTGGACGCC GGGCGTCGAG
TGGGGGTTTG AAGTGCGGTT GCCGCAGGGC TATGCGGGGC CGTCCGGCCG CACTCGCAAG
GAGCCGATTG GCCATTGGGC GGCGCGCGGC CTCGTCAAAG TTGACGGCTC GCCGCTGGGC
TCCGGCCCCA ACGCCGGCCT GCTGCTGCCG GCGGGGCCGA ACGGACCGGC CTTTCTCGTG
ACGCGCAATT TCGATGCGAT CTATTCCTAT AACGCCGCCG AATCCTATGC GTTGGCGATC
GCGCTCCTGT CCGACCGGCT GAAAGGCCGC AAGGGACCGA TAACGCCCTG GCCGACCAAT
GATCCCGGCC TCTCGCGCGC CGACCGGCGC GAGTTGCAGG CGCTGCTGAT GCGGCGCGGC
TATGATCTCG ACGGCAAGGC GGACGGCGTG ATCGGAACCA AGACCAAGCG GGCGATCAGC
GACTTTCAGG CGAAAGCCGG CCTAGCCCCG GACGGGCGGG CCAGCGTTTC GGTGCTCGCC
GCCGCGCGCG GCCGGTAA
 
Protein sequence
MTLPAHRAAS RRSLFSLRFA LGLVCAGATP SQAASLQECL AGLRPGILSS GVSAATFDKA 
TAGLQADPDI FALAQAQPEF KTPIWDYLAG LVDDERVEDG RAQMRKWAQP LSAAQSRYGV
DAATIVAVWG VESDFGRSFG KRPIIQSLAT LSCGPYRAAY FRTELTAAFK ILDHGDIVPE
QFVGSWAGAF GHTQFMPSTF LRTAVDFDGD GRRDLINSVP DALGSTAAYL RKGGWTPGVE
WGFEVRLPQG YAGPSGRTRK EPIGHWAARG LVKVDGSPLG SGPNAGLLLP AGPNGPAFLV
TRNFDAIYSY NAAESYALAI ALLSDRLKGR KGPITPWPTN DPGLSRADRR ELQALLMRRG
YDLDGKADGV IGTKTKRAIS DFQAKAGLAP DGRASVSVLA AARGR