Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_1233 |
Symbol | |
ID | 7092306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 1316756 |
End bp | 1317973 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643464574 |
Product | lytic murein transglycosylase |
Protein accession | YP_002361564 |
Protein GI | 217977417 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.0329877 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTGC CGGCCCACCG CGCCGCATCT CGGCGATCGT TGTTTTCGCT TCGGTTTGCG CTGGGGCTCG TGTGCGCCGG CGCGACTCCC TCGCAGGCGG CCTCGCTGCA GGAATGCCTC GCCGGCCTGC GGCCGGGGAT TCTCTCCAGC GGCGTCAGCG CCGCGACCTT CGACAAGGCG ACGGCCGGGC TGCAGGCCGA CCCCGATATT TTCGCCCTGG CGCAGGCGCA ACCGGAATTC AAGACGCCGA TCTGGGATTA TCTTGCCGGC CTCGTCGACG ACGAGCGGGT CGAGGACGGG CGCGCGCAAA TGCGCAAATG GGCGCAGCCG CTGTCCGCCG CGCAGTCGCG CTATGGCGTC GACGCCGCGA CGATCGTCGC GGTGTGGGGC GTCGAGTCCG ATTTCGGCCG CAGCTTTGGC AAACGGCCGA TCATCCAGTC GCTTGCGACG CTGTCCTGCG GCCCCTATCG CGCCGCCTAT TTCCGCACGG AGCTGACGGC GGCGTTCAAG ATCCTCGATC ATGGCGACAT CGTCCCGGAG CAATTCGTCG GCTCCTGGGC GGGCGCCTTC GGCCACACCC AATTCATGCC CTCGACCTTC CTGCGCACAG CCGTCGATTT TGATGGCGAC GGACGCAGGG ATCTCATCAA CTCGGTTCCC GACGCGCTCG GCTCGACCGC GGCCTATCTG CGCAAGGGCG GCTGGACGCC GGGCGTCGAG TGGGGGTTTG AAGTGCGGTT GCCGCAGGGC TATGCGGGGC CGTCCGGCCG CACTCGCAAG GAGCCGATTG GCCATTGGGC GGCGCGCGGC CTCGTCAAAG TTGACGGCTC GCCGCTGGGC TCCGGCCCCA ACGCCGGCCT GCTGCTGCCG GCGGGGCCGA ACGGACCGGC CTTTCTCGTG ACGCGCAATT TCGATGCGAT CTATTCCTAT AACGCCGCCG AATCCTATGC GTTGGCGATC GCGCTCCTGT CCGACCGGCT GAAAGGCCGC AAGGGACCGA TAACGCCCTG GCCGACCAAT GATCCCGGCC TCTCGCGCGC CGACCGGCGC GAGTTGCAGG CGCTGCTGAT GCGGCGCGGC TATGATCTCG ACGGCAAGGC GGACGGCGTG ATCGGAACCA AGACCAAGCG GGCGATCAGC GACTTTCAGG CGAAAGCCGG CCTAGCCCCG GACGGGCGGG CCAGCGTTTC GGTGCTCGCC GCCGCGCGCG GCCGGTAA
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Protein sequence | MTLPAHRAAS RRSLFSLRFA LGLVCAGATP SQAASLQECL AGLRPGILSS GVSAATFDKA TAGLQADPDI FALAQAQPEF KTPIWDYLAG LVDDERVEDG RAQMRKWAQP LSAAQSRYGV DAATIVAVWG VESDFGRSFG KRPIIQSLAT LSCGPYRAAY FRTELTAAFK ILDHGDIVPE QFVGSWAGAF GHTQFMPSTF LRTAVDFDGD GRRDLINSVP DALGSTAAYL RKGGWTPGVE WGFEVRLPQG YAGPSGRTRK EPIGHWAARG LVKVDGSPLG SGPNAGLLLP AGPNGPAFLV TRNFDAIYSY NAAESYALAI ALLSDRLKGR KGPITPWPTN DPGLSRADRR ELQALLMRRG YDLDGKADGV IGTKTKRAIS DFQAKAGLAP DGRASVSVLA AARGR
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