Gene Msil_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1228 
Symbol 
ID7092301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand- 
Start bp1312776 
End bp1313411 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content65% 
IMG OID643464569 
Productprotein of unknown function DUF1223 
Protein accessionYP_002361559 
Protein GI217977412 
COG category[S] Function unknown 
COG ID[COG5429] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.00906939 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAACTTT TTACAAGCCA GGGCTGTTCT TTCTGTCCGC CCGCCGATGC GTTACTCGCA 
ACTCTCGCGC GAAAGCCTGA CGTCGTCGCC GTTTCTTTCC CGGTCGACTA TTGGGACTAC 
ATCGGCTGGA AGGATACGAT GGCCTCGCCT GTTTTCGCCG CGCGCCAAAG GGCCTATGCG 
GCGGCCATCG GAGATCAGCA CGCCTATACG CCGCAGATGA TCGTCGACGG AATGCTGGGC 
GCCGTCGGCA GCGACCGCAA GGAGATCGAG TCGGCGATCG CTTTGAGCCG GGGCAGGGAA 
GGCGCGATGA GCGTTCCGGT GCGGCTGACG CAGGCCAATG GCGCGCTGGT CGTGGAGGTC 
GGCGACGGCG AGGGGGGACC TGCCGTGGTG CTTGCGCTGC GCGTGATGCG CTCGCGGACC 
GTGCATATCG GCCGCGGCGA GAATGCGGGC CGCAATGTGA CCTATACGAA TGTCGTCCGC 
GCCATGGATG AGATCGGGGT CTGGAGCGGC GCCGCCGCCA CCTTCCACGC CCCCGATGTG 
CGCGAAGATG GCGAAGGCTA TGTGATTTTC GTGCAGAAAG GGTCGCCGCA GCGGCCGGGC 
GTGATCCTCG GCGCCGCCAA GGCGCCGGGT TTTTGA
 
Protein sequence
MELFTSQGCS FCPPADALLA TLARKPDVVA VSFPVDYWDY IGWKDTMASP VFAARQRAYA 
AAIGDQHAYT PQMIVDGMLG AVGSDRKEIE SAIALSRGRE GAMSVPVRLT QANGALVVEV 
GDGEGGPAVV LALRVMRSRT VHIGRGENAG RNVTYTNVVR AMDEIGVWSG AAATFHAPDV 
REDGEGYVIF VQKGSPQRPG VILGAAKAPG F