Gene Msil_1201 details

Gene Information

• Locus tag: Msil_1201
• ID: 7092274
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylocella silvestris BL2
• Kingdom: Bacteria
• Replicon accession: NC_011666
• Strand: +
• Start bp: 1286340
• End bp: 1288142
• Gene Length: 1803 bp
• Protein Length: 600 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 643464542
• Product: 60 kDa inner membrane insertion protein
• Protein accession: YP_002361532
• Protein GI: 217977385
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0706] Preprotein translocase subunit YidC
• TIGRFAM ID: [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain; [TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 26
• Fosmid unclonability p-value: 0.00276614
• Fosmid Hitchhiker: No
• Fosmid clonability: decreased coverage

Sequence

Gene sequence

ATGAATAAGG ATTCGAGGAA TCTCTATCTT GCGATCGGCC TGTCGTGCCT CGTGATCGTT 
GGCTGGAGCT ATATCTTCGC GCCGAAACAG GCCGACCGGG CGCGCCTTGC CCAGACGCAG 
AGCCAAAATG CGCCGGCCGG AACGCAGCCG CAGTCTGCTG CGACGCCGCA GGACGCCGCC 
AATTTTTCGC CGCTTGACGC CCTTCCCAAG ACCCGCGCCG AGGCGCTCGC CGCCTCTCCG 
CGGCTAAAAA TCGATACGCC GGCGATTTTC GGCTCGCTGT CCCTAAAGGG CGCGCGGCTC 
GACGACGTTT CGCTCAAGGG CTATCGCGAG ACGGTCGACC CGAACAGCCC CAACATCGTG 
CTGCTGTCGC CGCAGGGGGC GCCGGACGCC TATTACGCCG AGGCTGGCTT CGTCCCGGCG 
CCCGGCGAGG CGGTCGCCGT GCCGCGCTCC GACACAGTCT GGACGGCTGA TCGCGATGCG 
CTGACCCCGG AGGCGCCGGT CACCCTGACC TATGACAATG GTCAGGGCCT TGTCTTCCAT 
CGCCAGATCG CGGTCGACGA CCGCTTCATG TTTACGATCA AGGACAGCGT CGAGAACAAA 
TCCGCCAAGC CGGTGACGCT CGCCTCCTAT GCGCTGGTTG CGCGCCACGG CCTCCCGAAA 
ACCGTGAATT ACGCGGTGCT GCATGAAGGA TTTGTCGGCG TCATCGGCGA CGCGGGCGTG 
CAGGAATTCC ATTACGACAA GATCGAAAAG GAAGACCACG GCTATAAGAC CTTCTCCGGC 
GCTGGCGGCT GGCTCGGCTT CACGGACAAA TATTGGGCCG CGACCGTCAT TCCCGACCAG 
GCGGCGCCGA TCGAAGCGCG CTTTTCGGCC AATTCGACGC CAAGCGGCAT TAAAACCTAT 
CGCGCTGATT TTGTCGGCCC CGTGCAGACC ATCGCTCCCG GAGCCACGAC CGAGGCGATG 
AGCCGCGTCT TCGCCGGCGC CAAGGAAGTC CATACGCTCG ACGCCTATCA GGCCGATCTC 
GGCATCAAGA AATTCGAGCT CCTGATCGAT TGGGGCTGGT TCTATTTCAT CACCCGGCCG 
ATGTTCCGGC TGCTGCATTT CCTTTATTCG CTGACCGGCA ATTTCGGCGT CGCGATCCTG 
CTTGCGACTG TGATCGTCAA GGGTCTGTTC TTCCCGCTCG CCAACAAGAG CTATCTGTCG 
ATGGCCAAGA TGAAGGCGGT CGCGCCCGAA ATCGCGGCGC TGCGGGAAAA ATATCCCGAA 
GACAAGATGA AGCAGCAGCA GGAGACGATG GCGCTCTACA AGCGCGAGAA GATCAATCCC 
GTCTCCGGCT GTCTGCCGAT GCTGATTCAG ATCCCGGTGT TCTTCGCGCT GTACAAGGTG 
CTGTTCGTCA CCATCGAAAT GCGGCATGCG CCCTTCTTCG GCTGGATCCA CGATCTCTCG 
GCGCCTGATC CCACCAATCT GTTCAATCTG TTCGGACTGC TGCCGTTCGA TCCGACGCAA 
CTCCCGCTGA TCGGTCATTT CCTCGCCATT GGCGTGTGGC CGCTTCTGAT GGGCGTCTCG 
ATGTTCGTCC AGATGAAGGC CAATCCCGAG CCCGCCGACC CGATGCAGAA GCAGATTTTC 
ACCTGGATGC CGGTGATCTT CACCTTCACC CTCGGCGGCT TCCCGGTCGG CCTCGTCATC 
TACTGGACCT GGAACAATAT TCTGTCCGTC TCCCAGCAAA CGCTCATCAT GAAGCGGGCG 
GGGGTGAAGG TCGAATTGTT CGACAATCTG GCGTCGCTGT TTCGCAAGAA GGTCACGAGT 
TGA 

 

Protein sequence

MNKDSRNLYL AIGLSCLVIV GWSYIFAPKQ ADRARLAQTQ SQNAPAGTQP QSAATPQDAA 
NFSPLDALPK TRAEALAASP RLKIDTPAIF GSLSLKGARL DDVSLKGYRE TVDPNSPNIV 
LLSPQGAPDA YYAEAGFVPA PGEAVAVPRS DTVWTADRDA LTPEAPVTLT YDNGQGLVFH 
RQIAVDDRFM FTIKDSVENK SAKPVTLASY ALVARHGLPK TVNYAVLHEG FVGVIGDAGV 
QEFHYDKIEK EDHGYKTFSG AGGWLGFTDK YWAATVIPDQ AAPIEARFSA NSTPSGIKTY 
RADFVGPVQT IAPGATTEAM SRVFAGAKEV HTLDAYQADL GIKKFELLID WGWFYFITRP 
MFRLLHFLYS LTGNFGVAIL LATVIVKGLF FPLANKSYLS MAKMKAVAPE IAALREKYPE 
DKMKQQQETM ALYKREKINP VSGCLPMLIQ IPVFFALYKV LFVTIEMRHA PFFGWIHDLS 
APDPTNLFNL FGLLPFDPTQ LPLIGHFLAI GVWPLLMGVS MFVQMKANPE PADPMQKQIF 
TWMPVIFTFT LGGFPVGLVI YWTWNNILSV SQQTLIMKRA GVKVELFDNL ASLFRKKVTS