| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1193 |
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| Symbol | |
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| ID | 7092266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 1278485 |
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| End bp | 1280488 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643464534 |
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| Product | transketolase |
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| Protein accession | YP_002361524 |
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| Protein GI | 217977377 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.043876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGC TCACGAAAAC TTCTAAGGGA GCGACGGACG CCGAGATGGC GAACGCCATC
CGCGTGCTGT CCATCGACGC CGTGGAGAAG GCGAACTCCG GCCATCCCGG CATGCCGATG
GGCATGGCCG ACGTCGCGAC CGTGCTGTTT ACGCGCTTCA TGAAATTCGA TCCCGCCGAT
CCCGCGTGGC CGGACCGCGA CCGCTTCGTC CTGTCTGCCG GCCATGGCTC GATGCTGCTC
TATTCCCTGC TCTATCTGCT CGGCTATCCG GGCGTCACGC GAGCCGAAAT CGAGCGCTTC
CGTCAGCTCG ATTCGAAGAC GCCGGGACAT CCCGAATATG GCCACACTGC CGGCGTCGAG
ACCACGACTG GGCCGCTCGG CCAGGGCCTC GCCGCGGCGG TCGGCATGGC GATCGCCGAA
AAACTGCTCG CCGCGCGCTT TGGCTCAGGC GCCGTCAATC ACCGCACCTA TGTCATCGCC
GGCGACGGCT GCTTGATGGA GGGTGTCAGC CAGGAGGCGA TCACGCTCGC CGGGCACCTG
AAACTGTCGA AACTGATCGT TCTTTGGGAT GACAATGGCA TCACCATCGA CGGCAAGGTT
TCGTTGGCCG ATTCGACCAA CCAGCTCGCC CGCTTCGAGG CGGCCGGATG GGCGGCAGCG
AGCGTCGACG GACATGATCC CGAGGCGGTC GCGAAGGCCC TCGAGGCGGC GCAATCCTCC
GACCGGCCGA CCCTCATCGC CTGCCGCACC ACCATCGGCT ATGGCGCGCC GACCAAGGCC
GGTACCCATG CGGTTCATGG CGCGGCGCTC GGCAAGGACG AGGTCGCGGG AACGCGCGCC
GCCTATGGCT GGCCGCATGC GCCTTTCGAG ATCCCCGATC CGATCGCCAG CGCCTGGCGC
GAGACGGCGG TGAAGGCGTC GGCCCCTCGC GCCGCCTGGG AGGCGCGGCT CGCAGCGCTC
GAGCCTGTGC TGCAGGCGCG ATTCAAGGCC GACATCAGCG GCGACATCGA GCCCGCGGTC
GCAGACGCGG TCGAAGCGTT CAAGAAGGCG GCGAGCGACG CCAACGCGCC GCAGGCGACG
CGCATCTCTT CGCAAAAGCT GCTCGACAAG CTCGCCCCGG CGCAGCCCAA TCTGATCGGC
GGTTCGGCCG ACCTCACGGG CTCCAACAAC ACCAAGGCCG CCGACATGAA GCCGGTGTCG
CCGGTCGATT TTTCCGGTCG CTACCTGCAT TACGGCATCC GCGAATTCGG CATGGCCGCC
GCGATGAACG GCATCGCCCT GCATGGCGGC TTCATCCCCT ATGGCGGAAC CTTCCTCGTC
TTTGCCGACT ATAGTCGGCC TGCGATCCGC CTTGCGGCGC TGATGGGCAT TCGCGTCATT
CATGTGCTGA CCCATGATTC GATCGGGCTC GGCGAGGACG GGCCGACGCA TCAGCCGGTC
GAGCACCTGG CCTCGCTGCG CGCCATTCCC AATCTGCTTG TGTTCCGCCC GGCGGACGCC
GTCGAGACGG CCGAGGCCTG GCAGCTCGCG CTGGAGCGCC GGACTTCGCC CTCGGTGATC
GCGCTGACGC GGCAGAATCT GCCGATCGTG CGGCGCGACC ATACGACTGA GAATCTCAGC
GCCGCCGGCG CCTATGTGCT GCGCGCGCCG GAAGGCGAAC GCGACGTGAC GCTGTTTGCG
ACGGGCTCCG AAGTTTCTTT GGCGGTCGAG GCGGCCGACC GGCTTCGCGC CGAAGGCGTC
AGGGCGGCCG TGGTGTCGAT CCCCTGCTTC GAGCTGTTCG CCGAGGCGCC GGCCGCCTAT
CGCGCCAGCG TCATCGGAAC GGCGCCGCGG GTCGGCGTCG AGGCGGCGCT GCGGCAGGGC
TGGGATATTG TGCTTGACCG GGATGACGGC TTCGTCGGCA TGTCGTCATT TGGCGCTAGC
GCTCCGGCCG GCGAACTCTA CAAGAAATTC GGCATTACCG TGGATGCGGT CGTCGCCGAA
GCCCGCGCGC GGCTCGCGCG CTGA
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| Protein sequence | MNALTKTSKG ATDAEMANAI RVLSIDAVEK ANSGHPGMPM GMADVATVLF TRFMKFDPAD
PAWPDRDRFV LSAGHGSMLL YSLLYLLGYP GVTRAEIERF RQLDSKTPGH PEYGHTAGVE
TTTGPLGQGL AAAVGMAIAE KLLAARFGSG AVNHRTYVIA GDGCLMEGVS QEAITLAGHL
KLSKLIVLWD DNGITIDGKV SLADSTNQLA RFEAAGWAAA SVDGHDPEAV AKALEAAQSS
DRPTLIACRT TIGYGAPTKA GTHAVHGAAL GKDEVAGTRA AYGWPHAPFE IPDPIASAWR
ETAVKASAPR AAWEARLAAL EPVLQARFKA DISGDIEPAV ADAVEAFKKA ASDANAPQAT
RISSQKLLDK LAPAQPNLIG GSADLTGSNN TKAADMKPVS PVDFSGRYLH YGIREFGMAA
AMNGIALHGG FIPYGGTFLV FADYSRPAIR LAALMGIRVI HVLTHDSIGL GEDGPTHQPV
EHLASLRAIP NLLVFRPADA VETAEAWQLA LERRTSPSVI ALTRQNLPIV RRDHTTENLS
AAGAYVLRAP EGERDVTLFA TGSEVSLAVE AADRLRAEGV RAAVVSIPCF ELFAEAPAAY
RASVIGTAPR VGVEAALRQG WDIVLDRDDG FVGMSSFGAS APAGELYKKF GITVDAVVAE
ARARLAR
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