| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1172 |
|---|
| Symbol | |
|---|
| ID | 7092245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 1259405 |
|---|
| End bp | 1260649 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643464513 |
|---|
| Product | putative transmembrane protein |
|---|
| Protein accession | YP_002361503 |
|---|
| Protein GI | 217977356 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3174] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.0696977 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTGGT TCGCGCCGCC TCTTTCCAGC TTCGCCGTCG CGCTTGGTCT CGGATTGCTG
ATCGGCCTTG AGCGCGAACG CAGCAAGGGC GTCGGCCCGT CGCGCGGCCC CGCAGGCATC
CGAACCTTCG CAGTCGCCTC CCTGTTCGGC GCCGTCGCCT TTCACATCGG CGGCCTGTTT
CTGCTGGCGC TCGCCGCCGT CTGCGTTGCG GGCCTCGTCG CCGTGTCCTA TCGGCGGACA
TCCACCTCCG ATCCGGGCCT CACCACCGAA ATGGCGCTGG CGTTCATGCC GATCCTGGGC
GCGCTCGCCG TCGCCGACGT CCGACTCGCC GCCGCCGTCG GGGTCGTCGT CGCGATCCTT
CTCGCCGCCA AGATTCCCCT CCACGCCTTT GTAACGAAGG TTTTAAACGA AGCTGAAGTG
AAGGACCTGC TTGTCTTCGC CGCAGCGACG CTGGTGATCT TTCCGCAGCT CCCGGATCGC
TATATGGGGC CGTTCGACGC GCTCAATCCG CGATCGATCT GGCTCCTCGT CATCCTTGTC
CTGACCATCG GCGGCTTCGG CTATATCGCC AAGCGCGCGC TCGGCGCGCG TTTCGGCCTT
CCGCTCGCCG GGCTCGCCTC CGGATTCGCG TCGAGCACGG CGACGATCGG CGCGATGGCC
GGCCTCGCCG CCAAAGAGCC CGCCTTGCTG CGGCCGGCGG TCGCCGCCGC GGTTCTGTCA
ACCATCGCGA CATTCATCCA GTTGGCTGTG TTGCTTGCGG CGACCAGCGC GCCAACGCTC
GCGGCGCTCG CTCCCGCCCT GATCGCGGGC GGTTGCGCCG CCACGCTTTA CGGCGCCGTT
TTCACCGCAC GCGCCTTTAT GACCGGCGAG ACGCAGGATC GCGAACCGGG GCCGGGGCGC
GCCTTCAGCA TCAAGACGGC TCTCGCGCTG GCGGCGACGA TGGCTTTGAT GCTCGTCGCG
GCGGCGGCGC TGAAGGACTG GCTGGGTGAA GCCGGACTGC TGATCGGAGC GGCGACAGCG
GGATTTGTCG ACGCCCATAG CGCCGCCATT TCGGTCGCCT CGCTTGCCGC GTCCGGCAGG
CTCGCGCCGC ACGAAGCCGC GCTTCCCATT ATGCTCGGCA TGACGAGCAA CACGGCGGCC
AAGATCATTG TAGCGCTCAG CGCCGGCGCG CGCGCCTTCA ACTTGCGGAT CGCGCCGGGC
CTCATCCTCG CCCAAGCCGC GGCCTGGGGC GGGTATCTGA TTTAG
|
|---|
| Protein sequence | MLWFAPPLSS FAVALGLGLL IGLERERSKG VGPSRGPAGI RTFAVASLFG AVAFHIGGLF
LLALAAVCVA GLVAVSYRRT STSDPGLTTE MALAFMPILG ALAVADVRLA AAVGVVVAIL
LAAKIPLHAF VTKVLNEAEV KDLLVFAAAT LVIFPQLPDR YMGPFDALNP RSIWLLVILV
LTIGGFGYIA KRALGARFGL PLAGLASGFA SSTATIGAMA GLAAKEPALL RPAVAAAVLS
TIATFIQLAV LLAATSAPTL AALAPALIAG GCAATLYGAV FTARAFMTGE TQDREPGPGR
AFSIKTALAL AATMALMLVA AAALKDWLGE AGLLIGAATA GFVDAHSAAI SVASLAASGR
LAPHEAALPI MLGMTSNTAA KIIVALSAGA RAFNLRIAPG LILAQAAAWG GYLI
|
|---|
| |