| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1165 |
|---|
| Symbol | |
|---|
| ID | 7093928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 1251791 |
|---|
| End bp | 1252798 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643464506 |
|---|
| Product | PfkB domain protein |
|---|
| Protein accession | YP_002361496 |
|---|
| Protein GI | 217977349 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.188666 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCCT CTTCTTGCCG TTACGACGTC GTCGGTCTTG GCAACGCGAT CGTCGACGTC
ATCGCCCGCG CCGACGATGA CTTTCTGCTC GCCCATGATT TGCGCAAGGG CGGCATGACC
CTGATCGACG AGGCGCGCGC AAAAGAGCTG TATGAGGCGA TGGGACAGAC GACGGTCGTC
AGCGGCGGCT CGGCGGCGAA CACCATCATC GGCCTCGCGG GCTTCGGGCG CAGCGCCGCC
TTCATCGGCA AGGTCAAGGC GGACGAACTC GGCGGCTTGT TCGCCCATGA CATCCGCGCG
GCGAAAGTCG GCTTTTCGAC GCCGCCTGCG GGCGACGGCG CCGAGAGCGC GCGCTGCCTG
ATCCTCGTCA CCCCCGACGG CCAGCGCACC ATGAACACGT TTCTCGGCGC CTGCCAGGAT
CTGACCGAAG CCGACGTCGA CGAGACGGTC ATCAAAGATT CCGCCGTGAT CTATCTCGAA
GGCTATCTGT GGGACCCGCC GGCCGCCAAG GACGCCTTTC GCAAGGCCTC GAAAATCGCC
CGGGCGGCGG GCCGCGAAAC GGCGCTGAGC CTGTCCGATT CCTTTTGCGT CGACCGCTAT
CGCGACGAGT TTCTGGATTT CATCCGTTCG GGCGGCGCGC AGATCATCTT CGCCAATGAA
AGCGAATTGC ATTCGCTGTA CCAGACCGCG GATTTCGACA CGGCGGTGGC GCTCCTGAAG
GCCGAAAATA TTCTGGGCGT CGTCACGCGC TCGGAACAGG GTTGTGTTGT GGTGAGGGGC
GACATGGTGG TGACGGCCCC CGCCTTTCCC GTCGATCAGG TTGTAGACAC AACAGGCGCC
GGCGATCTGT TCGCCGCGGG ATTTCTGGCC GGCTACACGC GCGGGCGCGA TTTTGACGAA
TGCGCCAAGC TCGGCGCGCT GGCGGCGGCG GAAATTATTC AACACATCGG CGCAAGGCCG
CAGACCGATC TGCGGCAGCT TGCGGAGCAG AATGGGCTCA AGGTGTAG
|
|---|
| Protein sequence | MPASSCRYDV VGLGNAIVDV IARADDDFLL AHDLRKGGMT LIDEARAKEL YEAMGQTTVV
SGGSAANTII GLAGFGRSAA FIGKVKADEL GGLFAHDIRA AKVGFSTPPA GDGAESARCL
ILVTPDGQRT MNTFLGACQD LTEADVDETV IKDSAVIYLE GYLWDPPAAK DAFRKASKIA
RAAGRETALS LSDSFCVDRY RDEFLDFIRS GGAQIIFANE SELHSLYQTA DFDTAVALLK
AENILGVVTR SEQGCVVVRG DMVVTAPAFP VDQVVDTTGA GDLFAAGFLA GYTRGRDFDE
CAKLGALAAA EIIQHIGARP QTDLRQLAEQ NGLKV
|
|---|
| |