Gene Msil_1157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1157 
Symbol 
ID7093920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp1243178 
End bp1244308 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content62% 
IMG OID643464498 
ProductOrn/DAP/Arg decarboxylase 2 
Protein accessionYP_002361488 
Protein GI217977341 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.0214354 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC GTATCCTGGA ATTTCTGCGT AACCGTCGTG AAGACGGTCC GTGCCTCGTG 
CTCGACCTCG ACGTCGTGCG CGAGAATTAT GTGTCCTTCG CCAGCGCCAT GCCGGATACG
CGCGTCTATT ACGCCGTGAA GGCGAACCCC GACCCGCGCG TGCTCGAACT GCTCGCAAAG
CTCGGCTCGT GCTTCGATAC GGCTTCGGTC GTCGAGGTCG AGGCGGCGCT CGCCAGCGGC
GCGACCGCCG ACCGCATCAG CTTCGGCAAT ACGATCAAGA AGGAGCGCGA CATCAAGCGC
GCCTATGAGC TTGGCGTCAG ACTGTTTGCG GTCGACTGCG AGGCCGAGGT CGAGAAGATC
GCGCGCGCCG CGCCCGGCTC GAAGGTGTTC TGCCGTCTGC TTTGCGACGG CAAGGGCGCC
GAATGGCCGC TGTCGCGCAA GTTCGGCTGC GACGTCGATC TCGCGCCGCG TGTGCTTGAA
CATGCGCATC GGCTGGGCCT CGTCGCCTAT GGCCTGTCGT TCCACGTCGG GTCGCAGCAA
CGCAATCCCG CCATGTGGGA CGGCGCGCTG AAGGCCGCCT CGGCGATCTT CAACGATCTC
GGCGAGCGCG GCATTGCGCT GCAGATGGTC AATCTCGGCG GCGGCTTTCC GACCCGATAC
CTCAAAGAGG TTCCGGCGGT GCGGGCCTAT GCCCAGTCGA TCATGCAGTC GCTGCGCAAG
CACTTCGGCA ATCACATCCC GGAGACAATC ATCGAGCCGG GACGCGGCAT GGTCGGCAAC
GCCGGCGTGA TCGAGGCGGA AGTCGTTTTG ATTTCAAGGA AGTCCGACGA CGATGTGGTG
AAGTGGGTCT ATCTCGACAT CGGCAAGTTC AATGGGCTCG CTGAAACCAT GGACGAGATG
ATCCGCTATC CGATCCGCAC CTCGTTCGAC GGCGATGAGA CCGAGCCTTG CGTGCTCGCC
GGGCCGAGCT GCGATTCCGT GGACGTGCTG TATGAGAAGG ACCCTTATCA CCTTCCTGTC
AGCCTGGAGA TCGGAGCCAA AGTGCTGATC GAGGGAACAG GCGCCTATAC GACGACCTAT
TCCAGCGTCG GCTTCAACGG CTTTCCGCCG CTCAAATCCT ATGTGATTTG A
 
Protein sequence
MTDRILEFLR NRREDGPCLV LDLDVVRENY VSFASAMPDT RVYYAVKANP DPRVLELLAK 
LGSCFDTASV VEVEAALASG ATADRISFGN TIKKERDIKR AYELGVRLFA VDCEAEVEKI
ARAAPGSKVF CRLLCDGKGA EWPLSRKFGC DVDLAPRVLE HAHRLGLVAY GLSFHVGSQQ
RNPAMWDGAL KAASAIFNDL GERGIALQMV NLGGGFPTRY LKEVPAVRAY AQSIMQSLRK
HFGNHIPETI IEPGRGMVGN AGVIEAEVVL ISRKSDDDVV KWVYLDIGKF NGLAETMDEM
IRYPIRTSFD GDETEPCVLA GPSCDSVDVL YEKDPYHLPV SLEIGAKVLI EGTGAYTTTY
SSVGFNGFPP LKSYVI