| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1154 |
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| Symbol | |
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| ID | 7093917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 1240120 |
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| End bp | 1241550 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643464495 |
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| Product | Homospermidine synthase |
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| Protein accession | YP_002361485 |
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| Protein GI | 217977338 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG5310] Homospermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.00185878 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGCAAT GGCCCGTGCA TGGCGCGATT ACCGGCCCGA TCGTATTGAT CGGCTTCGGA
TCCATCGGAC GCGGCATTTT GCCCTTAATC GAGCGTCATT TCACTTTCGA CAAATCGCGT
TTCACAGTGA TCGACCCGAA GGACAAGGAT CGCGCGCTGC TCGATGAGCG CGGCATAAAA
TTTATCCAGA AGCCCGTCAC GCGCGAGAAT TTCGTCGGCC TGCTGAAGCC GCTGCTGACG
GAGGGCGAGG GCCAGCCGTT CATCGTCAAT CTGTCTGTCG ACGTCTCCTC CGTCGCCATC
ATGCGTCTCG CCCATGAGGT TGGCGCGCTT TATGTCGATA CGGTCGCCGA GCCCTGGGTC
GGCTTTTACA CCGACCCGCG CCTGACGCTG TCGGAGCGCT CCAATTACGC GCTGCGCGAA
GCCGTGCTGG ATCTTCGGCG CGCGGTCGGT CCGGGGCCCA CGGCGGTTTC CTGCTGCGGC
GCCAATCCCG GCATGGTGTC CTGGTTCGTC AAGCAGGCGC TCTTGAATGT CGCCGCCGAT
TGCGGGATCG ACGCCGGCGA GCCGACGACG CGCGCGCATT GGGCCGAGCT GATGCGCCAG
GTCGGCGTCG AAGGAATCCA CATCGCCGAG CGCGACACCC AGCGCTCCGC CTCGCCAAAA
CCGATGGGCG TCTTCGTCAA CACCTGGTCG GTCGAGGGCT TCATTTCGGA GGGGCTGCAG
CCGGCCGAAC TTGGCTGGGG CACCTTCGAG AAGCATATGC CGCCGGAAGG CAAGCGGCAC
GCCTTTGGGC CCGACTGCGC GATCTATCTG ATGCACCCTG GCGCGGGCAC GCGCGTGCGG
TCCTGGACGC CGACCGCAAA GGCGCAGCAT GGCTGGCTGA TCACTCATAA TGAAGCGATT
TCGATCGCCG ACTATTTCAC CGTGCGCGAG GCCGGCGAGG TGGTCTATCG GCCGACCTGT
CACTATGCCT ATCGCCCCGC CGACGATGCG GTTCTCTCGC TCGACGAAAT GGCGGGGCAG
CAATGGGTTC CGCAGACAAA GCAGCACATT CTCGAAGAGG ACGAGATCGT CGACGGCATC
GACGAACTCG GCGTGCTGCT CTATGGCCAC GCGAAAAACG CCTATTGGTA TGGCTCGCAG
CTCTCGATCG AGGAGACGCG GCGCATCGCG CCCTATCAGA ACGCGACCGG GATGCAGGTC
AGCTCGGCGG TGCTCGCCGC CATGGTCTGG TCGCTGGAAC ATCCGCGCGC CGGGATCGTC
GAGGCCGATG AGCTCGATTT CCGCCGCTGT CTCGAGATCC AGCGTCCCTA TCTCGGGCCG
GTCATCGGCG AATACACCGA CTGGACGCCG CTGAAGGACC GCGGCGCGCT GTTTTCGGAA
GACCTCGATA CGGAAAGCCC GTGGCAGTTC AAGAATGTGA TCGTGCGGTA G
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| Protein sequence | MTQWPVHGAI TGPIVLIGFG SIGRGILPLI ERHFTFDKSR FTVIDPKDKD RALLDERGIK
FIQKPVTREN FVGLLKPLLT EGEGQPFIVN LSVDVSSVAI MRLAHEVGAL YVDTVAEPWV
GFYTDPRLTL SERSNYALRE AVLDLRRAVG PGPTAVSCCG ANPGMVSWFV KQALLNVAAD
CGIDAGEPTT RAHWAELMRQ VGVEGIHIAE RDTQRSASPK PMGVFVNTWS VEGFISEGLQ
PAELGWGTFE KHMPPEGKRH AFGPDCAIYL MHPGAGTRVR SWTPTAKAQH GWLITHNEAI
SIADYFTVRE AGEVVYRPTC HYAYRPADDA VLSLDEMAGQ QWVPQTKQHI LEEDEIVDGI
DELGVLLYGH AKNAYWYGSQ LSIEETRRIA PYQNATGMQV SSAVLAAMVW SLEHPRAGIV
EADELDFRRC LEIQRPYLGP VIGEYTDWTP LKDRGALFSE DLDTESPWQF KNVIVR
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