| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1149 |
|---|
| Symbol | |
|---|
| ID | 7093912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 1233013 |
|---|
| End bp | 1233774 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643464490 |
|---|
| Product | pyrroloquinoline quinone biosynthesis protein PqqC |
|---|
| Protein accession | YP_002361480 |
|---|
| Protein GI | 217977333 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG5424] Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C |
|---|
| TIGRFAM ID | [TIGR02111] coenzyme PQQ biosynthesis protein C |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.00427046 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCG AAGAAGCCCT GCTCAGCGCC GAGGAGCTGG AAGCCCGCCT GCGTCAGGTC
GGGGCCGAGC GCTATCACAA TCTGCACCGC TTCCATCGCC GCCTGCACAG CGGCGGCTGC
ACTTACGAAG AAGTGCAGGC CTGGGCGCTC AACCGTTACT ATTATCAATC CATGATCCCC
ATTAAGGACG CGACCGTTCT GACGCGGCTG ACCTCTTCCG AGGATCGCCG CCAGTGGCGC
AAGCGCATCG AGGATCACGA CGGTCTGCGC GAAGGCGACG GCGGCATCGA GCGCTGGCTG
AAGCTCACCG ACAGCCTCGG TTTTTCGAGA GACTATGTGA TTTCGACCGA AGGCATATTG
CCGGCGACGC GCTTCGCCGT TGACGCCTAT GTCGAATTCT GCCGCGCGCG CAGCGTGGTT
GAAGCAGTCG CCTCGTCGCT GACCGAATTG TTCTCGCCGA ATATCATCGG CGAACGGGTC
GCCGGCATGC TGGCGCATTA CAATTTTGTG AGCAGGGAGA CGCTCGCCTA TTTCTCGCAG
CGCCCGCCGC AAGCGCAGCG CGACGCGGAA TTCGCCCTCG CCTATTCAAT CGGTCACGCC
AGGACGCGCG CCGAACAGGA TCTTGTCATC AAGGCGCTCG AATTCAAATG CGCGGTGCTG
TGGTCGCAGC TTGACGCCCT GTGGGGCGCC TATGTCGAGC ACGAGATCCC GCCGGGCGCT
TGGCGGCCGG GCCAGACAGC CGCGCAGGGA GCTGCGGCAT GA
|
|---|
| Protein sequence | MSGEEALLSA EELEARLRQV GAERYHNLHR FHRRLHSGGC TYEEVQAWAL NRYYYQSMIP
IKDATVLTRL TSSEDRRQWR KRIEDHDGLR EGDGGIERWL KLTDSLGFSR DYVISTEGIL
PATRFAVDAY VEFCRARSVV EAVASSLTEL FSPNIIGERV AGMLAHYNFV SRETLAYFSQ
RPPQAQRDAE FALAYSIGHA RTRAEQDLVI KALEFKCAVL WSQLDALWGA YVEHEIPPGA
WRPGQTAAQG AAA
|
|---|
| |