Gene Msil_1143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1143 
Symbol 
ID7093906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp1228207 
End bp1229262 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content68% 
IMG OID643464484 
ProductMltA domain protein 
Protein accessionYP_002361474 
Protein GI217977327 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2821] Membrane-bound lytic murein transglycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.000848892 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGTTGCAG CGCTCCGCCT CGAATCGCTC GCCTTCTCCG ATCTTCCGGG GTTCGCCGAT 
GACGACCACG CCGCCGCCTT CGCGGCGTTT CGGCAGACGG CCGCCGCAAT CGTTGCGGGT
CGGCCTCCGT TGCGACAGGC CGCGCCGCCC TCGCCGGCGC TGATTTCAAT CTGCCGGCGC
GCGCTCGACG AGCCTTGCGG CGTCAGCGCC CCGGCCGCGC GCCGCTTCTT TGAAAGCTCC
TTTCGTCCGG TTCGCGGCGC CGCTCAGGCC GGCTTTTTCA CCGGCTATTA CGAGCCGGTC
GTCGATGGTT CGCTGACCCG GAGCGCGGAT TTTGCCGCGC CGATCCTGTC TCGCCCCAAT
AGTCCTGCCG ATACCAAACT GCCCGACCGG GCCGCCATCC TTTCGGGCGC GATCGACCAT
CTTTGCCAGC CGATCGTCTG GCTCAAGGAC GCGGTCGAGG TTTTTCTGAT CCAGGTGCAG
GGCTCGGCGC GGGTGCGCCT TGCCGACGGG TGCCTGTTGC GCCTCGTTTA CGCCGGGCGC
AACGGCTGGC CTTACCGCTC GATCGGCGCG ATCCTGATCG AAAGCCGCGC CATCGCGCCG
GACGCCATGT CGCTCGCCGC GCTGAAAGGC TGGATCAGGG CGCACGGCCA AAGACAAGGC
GAGGCCGGCG CGGAGCTGAT GGCCCGCAAT CCCTCCTATG TTTTCTTCGA GGCTGACGCG
ACGCTTGACC CGGCGGCCGG CCCGATCGGC GGCGCCGGAC TTCCGCTGAC GCCGCTGCGT
TCGCTCGCGG TGGACCGCAG CCTCTATGCC TATGGAACCC CTGTCTGGAT CGACGTAGAT
CTGGCCGCGT CCGAGGGCGG ACGCGTGCGC CGCCTCATGA TTGCGCAGGA TACCGGCTCT
GCTATTCTCG GTCCCGCGCG CGCGGATATC TTCTTCGGAT CGGGAGATGA GGCCGGCGCG
CGGGCCGGCA ATGTGCGACA TGCCGGCGAA TTCGTCGCTT TGCTTCCAGC CCGGGAATGC
GCCGCAGCGG GCGCCAGAGA GAGTGCGCCG CGGTGA
 
Protein sequence
MVAALRLESL AFSDLPGFAD DDHAAAFAAF RQTAAAIVAG RPPLRQAAPP SPALISICRR 
ALDEPCGVSA PAARRFFESS FRPVRGAAQA GFFTGYYEPV VDGSLTRSAD FAAPILSRPN
SPADTKLPDR AAILSGAIDH LCQPIVWLKD AVEVFLIQVQ GSARVRLADG CLLRLVYAGR
NGWPYRSIGA ILIESRAIAP DAMSLAALKG WIRAHGQRQG EAGAELMARN PSYVFFEADA
TLDPAAGPIG GAGLPLTPLR SLAVDRSLYA YGTPVWIDVD LAASEGGRVR RLMIAQDTGS
AILGPARADI FFGSGDEAGA RAGNVRHAGE FVALLPAREC AAAGARESAP R