| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1130 |
|---|
| Symbol | truA |
|---|
| ID | 7093893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 1218335 |
|---|
| End bp | 1219081 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643464471 |
|---|
| Product | tRNA pseudouridine synthase A |
|---|
| Protein accession | YP_002361461 |
|---|
| Protein GI | 217977314 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0101] Pseudouridylate synthase |
|---|
| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.131343 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCGTT TCAAGCTCCT GATCGAATAT GACGGAGCGC CCTTCGTCGG CTGGCAAAGA
CAGGCCAACG GCTTTTCCGT GCAGGAAGCG ATCGAGACCG CGCTTGGCGG TTTTACCGGC
GAGTCGGTTG CGATCCACGG CGCCGGGCGG ACGGACGCCG GCGTCCATGC GCGGGGCCAG
GTCGCCCATG TCGATTTTTC CCGCGACTGG CGGCCCGATG TCTTGCGCGA CGCCGCCAAC
GCCTGGCTGC GGCCGAACCC GATCGCGATC CTCAAGGCGG AGCGCGTCGA CGACGAATTC
AGCGCGCGTT TCTCGGCCGT GCGCCGGCAT TATCTCTATA AAATCATCAA CCGCCGCGCG
TCCTTGACCC TTGAGGCCGG ACGGTGCTGG GCCATTCGCC GCAGCCTCGA CGCCGGGGCC
ATGCATGAGG CGGCGCAGAC GCTGCTCGGC TTCCATGATT TCTCGACGTT TCGCGATTCC
GAATGTCAGG CGGAAAGCCC GCTGCGCACG CTGGAGCGCT TCGACGTGCT GCGCGACGGC
GAAAATATCG AGATCCATGT CGCCGCGCGC TCCTTTTTGC ATTCGCAGGT GCGCTCCATG
GTCGGCTCGC TCGCACATGT CGGTTCGGGC AAATGGCGCG TCGAGGATAT GGCGGAAGCG
CTGGCGGCGA AGGACCGCCG CCGTTGCGGC GTCGTCGCGC CGCCGGAGGG GCTTTATCTG
ATGCAGGTCG ATTACGAAGA GGCCTGA
|
|---|
| Protein sequence | MPRFKLLIEY DGAPFVGWQR QANGFSVQEA IETALGGFTG ESVAIHGAGR TDAGVHARGQ
VAHVDFSRDW RPDVLRDAAN AWLRPNPIAI LKAERVDDEF SARFSAVRRH YLYKIINRRA
SLTLEAGRCW AIRRSLDAGA MHEAAQTLLG FHDFSTFRDS ECQAESPLRT LERFDVLRDG
ENIEIHVAAR SFLHSQVRSM VGSLAHVGSG KWRVEDMAEA LAAKDRRRCG VVAPPEGLYL
MQVDYEEA
|
|---|
| |