| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1117 |
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| Symbol | |
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| ID | 7093879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 1204840 |
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| End bp | 1206597 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643464457 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_002361448 |
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| Protein GI | 217977301 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.573354 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCGCGGC TCGCGCTTGC CGCAGTCCTG ATTGCGCTGA CGCCCGCGAC CTTCGTCTCG
GCGCAAGCGC GAACGCGGGA TAATTTTGCG ATTGCGACGC CTTTCGAGGT CGGCGAGAGT
CCTGCCGGCA ATTACCTCGC GGCGCTGGTC GCGGGCGCCG AACGCGACAC GGTAGCGGCG
GCGACCTTTT TTCGCGAGGC GCTGCGTTTT GATCCGAACA ACCCGAAGCT GATCGAGCGC
GCCTTCGTCG CGGCCGTGTC AAACGGCAAT ATGCCGGAAG CGATCAGCCT CGCCGAGCGG
CTCGTCGCGC GCGAGCCGGA CAACACGCTC GCCCATCTCG TCCTTGGCGT GCAGGCGATC
AAGAAAGGGC AATTCGCCGC CGCCCGCGCC CATTTCATGC GCGGCGGCCC GGGCCAGCAG
CGCGACATTA CCGCGACTCT CCTGACCGCC TGGGCCTATC TCGGCGAAGG CAATCAGAAA
AAGGCGCTGG AGTTCGCCGA CCGTCTGCGC GACGAGAATT TCGGCGTGTT CCGGGATTAT
CACGCAGGTC TTATCGCCAG CGTTGCGGGC AATACGCCAG AGGCCGCGCG CCGGCTGAAG
GCCGCCTATC AGGCCGACAA GAACACGCTG CGCCTCGCCG ACGCCTACGC CCGCTTCCTG
GCGCGGCGGG GCGATATCGC GCAGGCGATA ACCGTCTATG TCGATTTCGA CCAGATCCTG
CCGAGCCATC CGAGCATTCT CGCCGCACTG GCCGATCTCA AGGCCGGCAA GCCGCTCGAC
CTTGTCGTCA AGACGCCCGA ACAGGGCGCC GCCGAAGTGC TCTACGGGCT TGGCGCCGCG
GGCGGACGCC AGGGCGACGA GCTCGCGGCC ATGATCTATC TGCGGCTGTC GCTCTATCTT
GCGCCGCAAA ACAGCCTCGC CATCATCACG CTCGCCGACC TCTATGAGCG CATCAAGCAG
AATGAGCAGG CGATCGACGT CTATGCGCTT GTTCCCGAAA AGGACCCGCA GCGAATCACC
GCCGACATCC AGACCGGCCT CATCCTCGAA ACGCTGGGCC GTTCCGAGGA TTCATCGGCC
TTTTTGAAGC GCATCGTCAG CGAGCATCCG AGCAATGGCG AGGCGCTGGC CGCGCTTGGC
AATCTGCAGC GCACGCATAA GCAATATGCC GACGCCATCG CGACCTACAC GAAGGCGATC
GACGAGGTCA ACAAGACGGG CAAGGCCGGC TGGGCGCTCT ATTATTTCCG CGGCATTTCC
TATGAGCGCA ACAAGCAATG GCCGCTTGCC GAGGCCGATT TCAAACAGGC GCTGGCGCTC
GCCCCCGACC AGCCGCTGAT CCTCAACTAT CTCGGCTACA GCTGGGTCGA CCAGGGCCTC
AATCTCGACG AGGCCTTCGC CATGCTGCAC AAGGCGGTCG ATCTGCATCC GACCGACGGC
TATATCGTCG ACAGTCTCGG CTGGGCGAAT TACAAGCTCG GCCGCTACGA CGACGCCGTC
AAGGAGCTTG AGCGCGCCAT CGACCTGAAG CCCGCCGATC CGGTGGTCAA CGATCATCTT
GGCGACGCCT ATTGGAAAGT CGGGCGCAAA CTCGAAGCGC ATTTCCAGTG GAATCACGCG
CGCGATCTCG GACCGGAGCC GGACGACAAG GACAGGATCT TGAAGAAGAT CGAGCACGGC
CTCAGCGACG ATCCGAAGCC CGCCGCCGCC GATGCCGACC CCAAGGACCA GGCGGCGTCC
AAGGAAAACG GCGGCTAG
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| Protein sequence | MPRLALAAVL IALTPATFVS AQARTRDNFA IATPFEVGES PAGNYLAALV AGAERDTVAA
ATFFREALRF DPNNPKLIER AFVAAVSNGN MPEAISLAER LVAREPDNTL AHLVLGVQAI
KKGQFAAARA HFMRGGPGQQ RDITATLLTA WAYLGEGNQK KALEFADRLR DENFGVFRDY
HAGLIASVAG NTPEAARRLK AAYQADKNTL RLADAYARFL ARRGDIAQAI TVYVDFDQIL
PSHPSILAAL ADLKAGKPLD LVVKTPEQGA AEVLYGLGAA GGRQGDELAA MIYLRLSLYL
APQNSLAIIT LADLYERIKQ NEQAIDVYAL VPEKDPQRIT ADIQTGLILE TLGRSEDSSA
FLKRIVSEHP SNGEALAALG NLQRTHKQYA DAIATYTKAI DEVNKTGKAG WALYYFRGIS
YERNKQWPLA EADFKQALAL APDQPLILNY LGYSWVDQGL NLDEAFAMLH KAVDLHPTDG
YIVDSLGWAN YKLGRYDDAV KELERAIDLK PADPVVNDHL GDAYWKVGRK LEAHFQWNHA
RDLGPEPDDK DRILKKIEHG LSDDPKPAAA DADPKDQAAS KENGG
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