| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1091 |
|---|
| Symbol | |
|---|
| ID | 7093853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 1177847 |
|---|
| End bp | 1178833 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643464431 |
|---|
| Product | peptidase S58 DmpA |
|---|
| Protein accession | YP_002361422 |
|---|
| Protein GI | 217977275 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3191] L-aminopeptidase/D-esterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAACC TGATCACCGA TGTGGCCGGC CTTCGCGTCG GCAACGCCCA AGACCCAAGG
ATCGCCTCCG GCGTCACGAC GGTTTTGTTC GAGGCCCCGG CCGTTGCCTC GATCGCGATC
CACGGCGGCG CGCCCGGCGG ACGCGACACG GCTTTGCTCG AACCCGGCAT GACGGTCGAG
AGCGTCAATG CGCTCGTGCT GTCCGGCGGC TCTGTTTACG GCCTCGATTC GATGGGCGGC
GTCACCGCCT TTTTGCGCGC GCAGGGTCAG GGCTTTTCAG TCGGCGCGAT CAAGGTGCCC
ATCGCCCCCG GCGCCGTGCT GTTCGATCTC CTCAATGGCG GCGACAAGGA TTTTGGCGGC
GAGCCGATCT ATTGGCGGCT CGGATTTGAA GCCGCCGCCG TGGCGGGGCT GGATTTTTCG
CTCGGCACGG CGGGCGCCGG CTATGGCGCG ACCACCGCGG ATCTCAAGGG CGGCCTCGGC
TCGGCGAGCG CGCAGAGCGC TTCGGGATTT ACCGTCGGCG CGCTTGTCGC CGTCAATGCG
GTCGGCCGGG CGACCATCGG CGAGGGGCCG CATTTCTGGG CGGCGCCCTA TGAGCGCGAA
GCGGAATTTG GCAGGCTCGG CTGGCCTGCC CTCTGGCCGA GTCCGGATTT CAAAATCAAG
AGCGTCGAGC CGCAGAATAC GACCATCGCG ATCGTCGCCA CCGACGCGGC GCTGACAAGG
TCCGAGGCCA AGCGCCTCGC CGTGATGGCG CAGGACGGCA TGGCGCGCGC GCTGCGCCCA
GCCCATGCGG CGATGGACGG CGATACGGTT TTTTCGGCGG CGACCGGGCT CGCGTCCAAA
CCCGCCACAT TGACCGACAA GATCGAGATC GGCGCGCTCG CCGCCGATTG CCTGGCGCGG
GCCATCGCCC GCGCGGTTTA TGAGGCGCGG GCGCTGCCTT TCGCGGCGAG CCCGCCAGAT
TGGCGCAAGC GTTTCGGCAA AAGTTAG
|
|---|
| Protein sequence | MKNLITDVAG LRVGNAQDPR IASGVTTVLF EAPAVASIAI HGGAPGGRDT ALLEPGMTVE
SVNALVLSGG SVYGLDSMGG VTAFLRAQGQ GFSVGAIKVP IAPGAVLFDL LNGGDKDFGG
EPIYWRLGFE AAAVAGLDFS LGTAGAGYGA TTADLKGGLG SASAQSASGF TVGALVAVNA
VGRATIGEGP HFWAAPYERE AEFGRLGWPA LWPSPDFKIK SVEPQNTTIA IVATDAALTR
SEAKRLAVMA QDGMARALRP AHAAMDGDTV FSAATGLASK PATLTDKIEI GALAADCLAR
AIARAVYEAR ALPFAASPPD WRKRFGKS
|
|---|
| |