Gene Msil_1088 details

Gene Information

• Locus tag: Msil_1088
• ID: 7093850
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylocella silvestris BL2
• Kingdom: Bacteria
• Replicon accession: NC_011666
• Strand: +
• Start bp: 1175977
• End bp: 1176591
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643464428
• Product: pyridoxamine 5'-phosphate oxidase
• Protein accession: YP_002361419
• Protein GI: 217977272
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0259] Pyridoxamine-phosphate oxidase
• TIGRFAM ID: [TIGR00558] pyridoxamine-phosphate oxidase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 45
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGAACAAGT TAACGGGGGA TGACCTTACC GACGCGCTTG AGCCGTTCGA TTTGTTCGAC 
GCCTGGTTTG CCGAGGCGCG CAAGGCCGAG TTGAACGATC CGGAGGCGAT GGCGCTGGCG 
AGCGTCGACG CCGATGGGCT TCCGGACGTC CGCATGGTGC TGCTCAAGGA GGCGAGCCCG 
GCGGGATTTG TATTCTACAG CAACGCGGAA AGCGCGAAGG GGCGCGAGCT TGCGGCAAAT 
CCCAAGGCCG CCGCCGTCAT GCATTGGAAA TCGCTGCGCC GACAGGTGCG CTTTCGTGGC 
GCGGCGACGC AGGTCTCAGG CGCCGAAGCC GACGCCTATT TCGCCTCAAG AGCCCGCGAA 
AGCCGGATCG GCGCCTGGGC GAGCCAGCAG TCGCGGCCGC TCGAAAGCCG CTTCGCGCTT 
GAAAAAGCCG TCGCCAAATA TGCGCTGAGA TATGCCGTCG GCGAAATCCC GCGGCCGCCC 
TATTGGACCG GCTACCGGAT CGCGCCGGTG CAGATTGAGT TCTGGTCGGA CGGCGCCTTC 
CGGCTGCATG ACCGAATCGT CTTCCGCCGC GATTCAATCG ACGCGCCCTG GCGCAAGGAG 
CGGCTCTACC CGTGA 

 

Protein sequence

MNKLTGDDLT DALEPFDLFD AWFAEARKAE LNDPEAMALA SVDADGLPDV RMVLLKEASP 
AGFVFYSNAE SAKGRELAAN PKAAAVMHWK SLRRQVRFRG AATQVSGAEA DAYFASRARE 
SRIGAWASQQ SRPLESRFAL EKAVAKYALR YAVGEIPRPP YWTGYRIAPV QIEFWSDGAF 
RLHDRIVFRR DSIDAPWRKE RLYP