| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1071 |
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| Symbol | |
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| ID | 7091900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 1156921 |
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| End bp | 1160358 |
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| Gene Length | 3438 bp |
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| Protein Length | 1145 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643464411 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_002361402 |
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| Protein GI | 217977255 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc)
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.049044 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCGC GCTACGCCGA ACTGGCGGCG ACGACGAATT TCTCCTTTCT GCGCGGCGCC
TCGCATCCCG AAGAACTCGT CGCCGCGGCG ATGGCTCTCG GACTTGCCGG CCTGGGGATC
GCCGACCGCA ATTCGCTTGC CGGCGTCGTC CGCGCCCATC GTTTTTTGAA AGCCAATAAG
AGCCCGTCCT TTCATCTCGC TATCGGCGCG CGGCTCGTTT TCTGCGACGG CGCGCCAGAC
ATACTGAGCT ACCCGCGCGA CCGCGCCGCC TATGGACGCC TGACGCGGCT TTTGACTCGC
GCCAACGCCC GCGCGCAAAA AGGCGTCTCC CTTCTGCGTT CAAGCGACCT CATCGAAGCG
GCGCAGGGAC AACAGCTTAT CCTCATGCCG GAAACAACAT GGGAAAAGGG CGACGAAACC
AGGCGATCCA GGAAAATCCA CGCCGAATTG CATGATAATA ATCATTATAA AAATCCTGTC
GATCTTTTGG ACGACGCCCA TGCGCTGGCT TTTGGCCAGG AAATGCCTCT CATCGAACAG
TTGCGCGAGG CCTCGAACGG GCGCCTGTGG CTTGCCGCCA AAATGACCTA TGGCGTTTCA
ATGCGGCGCG ATCTTGCAAG CCGCATCGCG CTTTCAAGAA AAACGAACAC ACCCCTCATC
GCTGTCAATG ACGTCATCAT GCATACGCCC GAGCGGCGCC CGCTGCAGGA TGTGCTGAGC
GCCATCCGCG CGGGACAAAC GCTCGATCGC TTGGGGCTCG CCCTTGAAGC CAATGCCGAA
CGTCATATGA AAAGCGCGGC GGAGATGGCG CGGCTTTTTG CCGGCGCGCC TCAGGCGATG
GAAGAGACGC TGCGCTTTCT CGACGGGCTG GACTTCAGCC TTGATGAATT GCGCGGCGAC
TATCCCGAGG AATTGCGCGA AGGATTTGAA ACGCCGCAAG CCGCGCTCGC TTTTTTTGCG
CGCGAAGGGG CGAAGTTCCG CTTTCCGGAC GGCGTTCCTC CCTCGGTCGA GACGGCGATC
GCGCATGAAT TGAAGCTGGT CGAACAGCTT GATTACGCGC CCTATTTCCT GACCGTACAC
GATATTGTGC GCTTCGCCCG CACAGAGAAG ATTCTATGCC AGGGCCGCGG CTCGGCGGCG
AATTCGACGC TTTGCTATTG TCTTGGCGTG ACCGAGGTCA ATCCCGCCTT TCACAATCTC
CTGTTCGAGC GTTTTATCTC GCCTGACCGC AATGAGCCGC CCGACATCGA CGTCGATTTC
GAGCATGAGC GGCGCGAACA GGTCATGCAA TATATCTATG CGCGTTACGG CCGCGCCCGC
GCCGCTTTGA CGGCGAGCGT CATCACCTAT CGCGCCCGCT CGGCGATCCG CGAAGTGGGC
AAGGCGTTTG GCCTCTCGGA CGACGTCGTC TCGGCCCTGT CCGCGACGAT CTGGGGCGGG
TCGTCGTCGA GCGTCGAAGC CGGGGAGGCC CAAAAGGCCG GCTTCGATCC GACCGAGGCG
CGGCTGGCGC AGACGTTAAA GCTCGCCGAG GAGTTGATCG GTTTTCCGCG CCATCTGTCG
CAGCATACGG GCGGCTTCGT CATCACGCGT TCGCGGCTCG ACGAGGTGGT TCCGATCATG
AACGCCGCGA TGGAGGATCG CACCACCATC GAATGGGACA AGGACGATCT CGACGCGCTC
GGCATTTTGA AGATCGACGT GCTGGCGCTC GGCATGCTGA CCTGCCTGCG CAAGGGGTTT
GACCTCATCA GGGAGCATTA TGGCGAAGAG CTGACCATCG CGACCCTGCC GCCGGAACAG
GGCGCCGTCT ATGAGATGAT CTCGCGCGCC GACACGATCG GCGTTTTCCA GATCGAGAGC
CGGGCGCAGA TGTCGATGCT GCCGCGGCTG CGGCCGAGAG AATTCTACGA TCTCGTCATT
GAGGTCGCGA TCGTGCGGCC AGGCCCGATT CAGGGCGACA TGGTGCATCC CTATCTGCGG
CGGCGACAGG GATTGGAGCC TGTCTCCTAT CCCTCGAAGC AGCTCGAAGA GGTGCTGGGC
AAGACCCTTG GCGTGCCCCT GTTCCAGGAA CAGGCGATGA AGATCGCCAT CGTCGCCGCC
GGCTTCACGC CCTCCGAGGC CGATCAATTG CGCCGGGCCA TGGCGACGTT CAAACATGTC
GGCACAATCG GCGCCTTCCG CGCCAAGATG ATCGAAGGGA TGGTCGCCCG GGACTATTCA
CGCGACTTCG CCGAGCGCTG CTTCAAGCAG ATCGAAGGTT TCGGCTCTTA TGGTTTTCCG
GAAAGCCACG CCGCTTCCTT CGCGCTGCTT GTTTACGCTT CGGCCTGGAT GAAATGCCGC
TATCCCGACG CTTTCGCCTG CGCGCTTCTC AACGCTCAGC CGATGGGATT TTATGCGCCC
GCGCAAATCC TGCGCGACGC GCGCGAACAT GGCGTTGGAG TCGAAGAGGT CGACGTCAAT
TTTTCTCATT GGGATTCGAC GCTGACGCCG GCGGCTGAAC GTCGGCCGCC GCATCCCCGC
CACGCCTCGA TGCAGGGCGA GATTTTCGCG ACTTGCGGGA TCAGCCTGGG ATTTCGTCAG
ATCAAAGGCT TTGCCGAACA TGATGCAACC CAGCTCGTCG CCATGCGGGA CAGGGGCTAT
GATTCCATTC GCGATCTCTG GCTGCGCGCG GGCCTGTCTC TTGCCGTCAT GGAGTTGCTT
GCCGGGGCCG ACGCCTTCCG CTCGCTAGGG CTCGACCGGC GCGAGGCGCT CTGGGCCGTG
CGCGGCCTGA ACCGCGCGGG CGACAAGGAT GATCTGCCCT TGCTCAAGGA CCTTAGCTGG
CGCGCGACCG AAGCCGAGGC AAAGCTCCCG CCGATGCTAC TTGGCGAACA TGTCGTCGAG
GATTATCGCC GTCTCTCCCT CTCGTTGAAG GCGCATCCGG TCTCTTTTCT GCGCGAGAGG
CTGACGCAAA AAAGGATCCT GCGCGCGGAT GATTTGAAGA ACCAGCCTGC GGGCTCCCGC
ATCACCGTGG CGGGTCTCGT TCTCGTGCGC CAGCGTCCGG GCACGGCGAG CGGCGTCATT
TTCCTGACGA TCGAGGATGA AACGGGAATC GCCAACGCCA TTGTCTGGCC GAAAATTTTT
GAGCGGCTGC GCCGGATCGT CATCGGCGCC CGCTTCCTCG CCGTGACCGG CCGCTTGCAG
AAAGAATCCG ACGTCATCCA TGTGGTGATG GAGCGCGCGG AGGATCTCAG CCCGCTGCTG
GCTCTCTTGT CGGATCATGG CGGCGCGGTT TCGTCCTTGG CCCGGGCGGA TGAAGTCAGG
CGGCCAAATC TTCGCGATTC CCGCGCCCCG CGCGAACCGG TCGCGCCCGC GCGGTCCAAG
CCTGTAGAAA CGCCGTCGCC CGCGCCGCCG CAAGAGGATT GGCGCCGCGT CCTGCCGAAG
GGACGAAATT TCCATTAA
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| Protein sequence | MSPRYAELAA TTNFSFLRGA SHPEELVAAA MALGLAGLGI ADRNSLAGVV RAHRFLKANK
SPSFHLAIGA RLVFCDGAPD ILSYPRDRAA YGRLTRLLTR ANARAQKGVS LLRSSDLIEA
AQGQQLILMP ETTWEKGDET RRSRKIHAEL HDNNHYKNPV DLLDDAHALA FGQEMPLIEQ
LREASNGRLW LAAKMTYGVS MRRDLASRIA LSRKTNTPLI AVNDVIMHTP ERRPLQDVLS
AIRAGQTLDR LGLALEANAE RHMKSAAEMA RLFAGAPQAM EETLRFLDGL DFSLDELRGD
YPEELREGFE TPQAALAFFA REGAKFRFPD GVPPSVETAI AHELKLVEQL DYAPYFLTVH
DIVRFARTEK ILCQGRGSAA NSTLCYCLGV TEVNPAFHNL LFERFISPDR NEPPDIDVDF
EHERREQVMQ YIYARYGRAR AALTASVITY RARSAIREVG KAFGLSDDVV SALSATIWGG
SSSSVEAGEA QKAGFDPTEA RLAQTLKLAE ELIGFPRHLS QHTGGFVITR SRLDEVVPIM
NAAMEDRTTI EWDKDDLDAL GILKIDVLAL GMLTCLRKGF DLIREHYGEE LTIATLPPEQ
GAVYEMISRA DTIGVFQIES RAQMSMLPRL RPREFYDLVI EVAIVRPGPI QGDMVHPYLR
RRQGLEPVSY PSKQLEEVLG KTLGVPLFQE QAMKIAIVAA GFTPSEADQL RRAMATFKHV
GTIGAFRAKM IEGMVARDYS RDFAERCFKQ IEGFGSYGFP ESHAASFALL VYASAWMKCR
YPDAFACALL NAQPMGFYAP AQILRDAREH GVGVEEVDVN FSHWDSTLTP AAERRPPHPR
HASMQGEIFA TCGISLGFRQ IKGFAEHDAT QLVAMRDRGY DSIRDLWLRA GLSLAVMELL
AGADAFRSLG LDRREALWAV RGLNRAGDKD DLPLLKDLSW RATEAEAKLP PMLLGEHVVE
DYRRLSLSLK AHPVSFLRER LTQKRILRAD DLKNQPAGSR ITVAGLVLVR QRPGTASGVI
FLTIEDETGI ANAIVWPKIF ERLRRIVIGA RFLAVTGRLQ KESDVIHVVM ERAEDLSPLL
ALLSDHGGAV SSLARADEVR RPNLRDSRAP REPVAPARSK PVETPSPAPP QEDWRRVLPK
GRNFH
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