Gene Msil_1068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1068 
Symbol 
ID7091897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp1154737 
End bp1155603 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content65% 
IMG OID643464408 
Product6-phosphogluconate dehydrogenase NAD-binding 
Protein accessionYP_002361399 
Protein GI217977252 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.135252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGA TCGCTTTCCT TGGTCTCGGC GTGATGGGGT TTCCCATGGC CGGGCATCTT 
GCCCTGAAGG GCCACACGGT CACTGTCTAC AATCGGTCAG CCGCCAAGGC CCAAGCCTGG
GTCGAAAAAT ATGGCGGCGC CTCCGCGCCG ACCCCAAGGG CAGCGGCGCA AGGCCAGGAG
TTCGTGATGG CCTGCGTCGG CAATGACGCC GACCTGCGCA GCGTGGCTTT TGGCGAGGAC
GGCGCTTTCG CGGGGCTCGC CCAAGGCGCG ATTTTCGTCG ACCACACGAC GGCGTCGGCC
GAGGTGGCGC GCGAATTGAA TGCGGCCGCG GCGGCGAATG GGCAAGGATT TGTCGACGCG
CCCGTCTCGG GCGGCCAGGC AGGGGCCGAG AATGGCGCGC TGTCGATCAT GTGCGGCGGC
GATCGGGAAC ATTACGCCCG CGTCGAGCCG ATTGTTGCAG CCTATGCCAA GGCTGTCCGC
CTGATGGGTC CGGCGGGGTC CGGCCAGCTC ACCAAAATGG TCAATCAGAT CTGCATCGCA
GGCCTCGTCG AGGCGTTGGC GGAAGGATTG CATTTTGCAA AATGCGCGGG GCTCGATCCG
CAGGCGGTGG TCGAGGTCAT CTCGAAGGGC GCCGCGCAAT CCTGGCAGAT GGAGAACCGC
TCCAAGACGA TGACCGAGGG CAAGTTCGAC TTCGGCTTTG CGGTCGACTG GATGCGCAAG
GATCTCGCGA TTTGCCTCGC GGAAGCGCGC CGCAATGGCG CAAGGCTCCC GACGGCCGCG
CTGATCGATC AGTTCTACGC CGAGGTTCAG GCCATGGGCG GATCGCGATG GGATACGTCG
AGCCTGATCG CCCGGCTTGA AAGATGA
 
Protein sequence
MAKIAFLGLG VMGFPMAGHL ALKGHTVTVY NRSAAKAQAW VEKYGGASAP TPRAAAQGQE 
FVMACVGNDA DLRSVAFGED GAFAGLAQGA IFVDHTTASA EVARELNAAA AANGQGFVDA
PVSGGQAGAE NGALSIMCGG DREHYARVEP IVAAYAKAVR LMGPAGSGQL TKMVNQICIA
GLVEALAEGL HFAKCAGLDP QAVVEVISKG AAQSWQMENR SKTMTEGKFD FGFAVDWMRK
DLAICLAEAR RNGARLPTAA LIDQFYAEVQ AMGGSRWDTS SLIARLER