Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_1050 |
Symbol | |
ID | 7091878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 1137354 |
End bp | 1138550 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643464389 |
Product | sodium/glutamate symporter |
Protein accession | YP_002361381 |
Protein GI | 217977234 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0786] Na+/glutamate symporter |
TIGRFAM ID | [TIGR00210] sodium--glutamate symport carrier (gltS) |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.0733546 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGTCA TTGAAGCCTC GGGGCTCCTC ACCTTCACCC TTGCGATCGT CGTGTTCTTT ATCGGCGCCG GCCTCAATCA TTTGATCGCG CCGCTGCGCC GCTGGAACAT TCCCGAAGCG GTGACGGGCG GACTGACGGC CGCGCTCGCG ACGCTCGTCG CCTATCGGGT GTTCGGCGTC GAAATTCATT TCAGTCTCGA CGCGCGGGAC ATGCTGCTGT TGTATTTCTT CACCGGCATC GGCCTCAACG CCAAGCTTGG CGATCTCGTC GCCGGAGGGC GGCCGCTTCT CGTGCTGCTG GCGGTGACGC TTGTCTATCT GGTGATCCAG AATTTGATCG CGGCGGGCGC GGCATCTGCC CTGCGTCTCC CCGAGGGAAT CACTGTGCTG CTCGGCTCGG CTTCGCTGAT CGGCGGCCAT GGCACGACCA TCGCCTGGGC GCCTCTGATC ACGGAGCGCT TCGGGCTCGC CAACGCGATG GAGATTGGCG TCGCCTCCGC GACGCTCGGC CTCGTCATCG CCAGCCTGAT CGGCGGCCCC GTCGCCGGCG TCCTGATATC GCGCTACAAG CTCGTCGGGC CGATGAATGA GGCGCCCTCC GTCGGCCTGC CCGACGATAC GAAACTCGAC GACCTCAACC ACGTCAATCT GCTGCGGACG ATTCTCGTTC TCAACATCGT GATATTGATC GGCTTTCTGG CGCATGAAGC GCTGGTCGAA GCGGGCGTGC GCATGCCGCG CTTCGTCGTC TGCCTGCTGG TCGCAATCTT GTTCACAAAC ACCATCCCGC GCCTGCTGCC GCGCCTCGAT TGGCCCTCGC GCAGCCGCTC GCTCGCGCTG ATTTCCGATC TGTCGCTGAA CGTCTTTCTC GTGATGTCCT TGATGAGCAT GCAGCTCTGG ACGCTCGGCG GCCTCGGCCC GGCGCTGGTC GCCGTGCTCG CCGCGCAGAC GATCGTCGCG GTGATCTATA TGTTGTTCGT CGTCTTCCCG GCCATGGGCC GCAACTATGA GGCGGCGGTT ATCGCGGCGG GATTTGGCGG CATCAGCCTC GGCGCCACGC CGACCGCCAT CGCCAATATG ACGGCGATCA CCAAGGTCCA TGGCGCGGCG CCGACCGCAT TCATTATCTT GCCGCTCGTG TCGGCGTTTT TCATCGACAT CGCCAATGCG GGCGCCATCG GCTTTCTGGT GCGCTAG
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Protein sequence | MRVIEASGLL TFTLAIVVFF IGAGLNHLIA PLRRWNIPEA VTGGLTAALA TLVAYRVFGV EIHFSLDARD MLLLYFFTGI GLNAKLGDLV AGGRPLLVLL AVTLVYLVIQ NLIAAGAASA LRLPEGITVL LGSASLIGGH GTTIAWAPLI TERFGLANAM EIGVASATLG LVIASLIGGP VAGVLISRYK LVGPMNEAPS VGLPDDTKLD DLNHVNLLRT ILVLNIVILI GFLAHEALVE AGVRMPRFVV CLLVAILFTN TIPRLLPRLD WPSRSRSLAL ISDLSLNVFL VMSLMSMQLW TLGGLGPALV AVLAAQTIVA VIYMLFVVFP AMGRNYEAAV IAAGFGGISL GATPTAIANM TAITKVHGAA PTAFIILPLV SAFFIDIANA GAIGFLVR
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