| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1048 |
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| Symbol | |
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| ID | 7091876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 1134849 |
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| End bp | 1135952 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643464387 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002361379 |
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| Protein GI | 217977232 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.0768467 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCGA CCTCCCTGAC AGCAAGGTTT CTTGCGCGCA GCTTTGTTCC CTTGGCCGCG
GCGGCCCTGC TGCTCGCGGG CTGCAAGGAA CAGCAGGAGG AGCATGCGCC GCTGCCGCGC
CCGGTCCGCG CCATCACCGC CGAAAGGAGT GAGGACGGCG AGACGGCCAT GCTCACCGGA
CAGATTCTCG CCGAAAACGA AGCGGCGCTG GCGTTTCGGA TCGGCGGCCG CATGATCGAG
CGTTCCGTTG GCGTTGGCGA TGCGGTGACG CCGGACAAAG TGCTGGCGAA GCTCGACCCG
GTGAATGAAG AAAATGCGCT GCGCTCGGCA AGGGCGGCGC TTTCGGCGGC CGAGGGGCGG
CTCGTTCAGG CGCGCAATAA TTTTGATCGC CAGAATACGC TGCTGCAGCG CGGCTTCACG
ACGCGGGTTC TGTTCGATCA GGCCGAACAG GAATTGCGCA CGTCGCAATC GGCCGTCGAC
GACGCGCAGG CGCAGCTGCA AATGGCCGAG GACCGGCTGA GCTTCACCGA GCTTCGCGCC
AATGTGACGG GATCGGTCAC GGCCCGGCTT GCCGAGGCCG GCGAGGTCGT CCAACCGGGC
CAGACCATCT TCCAGGTTGC CCGCGAGGAC GGCCGCGACG CGGTATTCGA TGTTCCCGCC
AATCTGTTGC GATCCGTGCC GGCGAACGCC CCGATCGCGG TCACTCTGAC GGATGATCCG
TCGACGATCG CGCAAGGACG CGTGCGCACG GTCGATCCGC AGGCCGATCC CGTCACTCGC
ACCTTTCGCG TCCGGGTGGG CTTGATCGAT TCGCCGGCCG CGATGCGTCT TGGCGCGACC
GTGACCGGCC GCGTGCAGCT CGAAGGAACT CCCGGCGTCA AGATTCCGGC GAGCGCCCTG
ACCAAGATCA ACAATCAGCC TGCGGTCTGG ATCGTCGATC CGAAAAGCTC CACCGTCGCG
CTGCGCAATG TCGAAATCGC CCGCTTCGAT CCGGGCTCCG TGCTGGTTTC CGAAGGGCTC
GACGACGGCG ACATCGTCGT CACCGCCGGG GTGCAGGCGC TTCATCCGGG CCAGGCCGTG
CGTTTGCTCG GATCGCGCTC ATGA
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| Protein sequence | MRATSLTARF LARSFVPLAA AALLLAGCKE QQEEHAPLPR PVRAITAERS EDGETAMLTG
QILAENEAAL AFRIGGRMIE RSVGVGDAVT PDKVLAKLDP VNEENALRSA RAALSAAEGR
LVQARNNFDR QNTLLQRGFT TRVLFDQAEQ ELRTSQSAVD DAQAQLQMAE DRLSFTELRA
NVTGSVTARL AEAGEVVQPG QTIFQVARED GRDAVFDVPA NLLRSVPANA PIAVTLTDDP
STIAQGRVRT VDPQADPVTR TFRVRVGLID SPAAMRLGAT VTGRVQLEGT PGVKIPASAL
TKINNQPAVW IVDPKSSTVA LRNVEIARFD PGSVLVSEGL DDGDIVVTAG VQALHPGQAV
RLLGSRS
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