Gene Msil_1044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1044 
Symbol 
ID7091872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp1127674 
End bp1128711 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content62% 
IMG OID643464383 
Productprotein of unknown function UPF0118 
Protein accessionYP_002361375 
Protein GI217977228 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.157129 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGCA GCGTCACGCG CATCGCCTCG GCGATGATCA TCGCTTTTCT CGTCGTCGGC 
GCGTTATATT TCGCCGATGC AGTGTTCGAG CCCGTCGCGT TCGCGCTGTT CGCCATCGCC
GTCGTCTGGC CCTTGCAGAA AGCGCTCGAG ACAAGGCTGC CGCGTGGGCT GGCGCTGATC
GCGACCGTTC TCGTGACCCT CATCGTCGTC GTCAAGCTGA CGTCAATGGT CGCCTGGGGC
GGCGGCCAGA TCGGGCAATG GCTCAGCGCC AACTTCGATC GTTTTCAGGC GCTGTATTTC
GCCTGGGCGA AATGGCTCGA GCAACATGAC ATCTTCATCG CGACCGTCGT CGCCGAGCGC
TTCAACGTGC TCTGGCTGCT GCGGCTGTTT CAGACCGTCG CCTTGCGGCT CAACAGCCTG
ATCGGCTTCT CGCTGCTGAT CTTCATCTTT CTGGCGATGG GCCTTTTGGA GGCCGAGGCG
TTTTCGAAAA ATCTGCGCAC GGTCGGCGGC GAGGCCGGCG AAAGGCTGAT TGCGGCGGGA
GCCGCCACCG CCCGCAAATT TCGCCGCTAT ATGCTCGTGC GCACGGTCGC CAGCATTCTC
ACCGGCCTGA TCGTCTGGGG GTTCGCGACG TTAGTCGGCC TCGAGCTCGC GGCCGCCTGG
GGCGTCATAT CCTTCGCGCT GAACTACATT CCCTTCATCG GGCCGCTGAT TGCGACCGTG
CTGCCGGCGC TGTTCGGCTT CGCGCAAACG GGATCCTGGG AGACAGGGCT TTTGATCCTC
GCCGTATTGA CCCTGGTGCA GTTCCTGATC GGCAGCTATT TCGAGCCCTT GTTTACGGCG
AAGACGCTGT CGATCTCGCC CTTCGCCGTC GTCTTCGCGG TGTTTTTCTG GGGATTTATC
TGGGGCTTGC CGGGCACTTT CATCGGCGTT CCGATCCTGA TCGCCTGCGT TACCGTCTGC
GAGCAATTTC CAGCGAGCCG CTGGCTCGCT ATTCTGTTGT CCGGCAAAGC TGAAGATCGA
AAGCCGCCCG TCGGATGA
 
Protein sequence
MDSSVTRIAS AMIIAFLVVG ALYFADAVFE PVAFALFAIA VVWPLQKALE TRLPRGLALI 
ATVLVTLIVV VKLTSMVAWG GGQIGQWLSA NFDRFQALYF AWAKWLEQHD IFIATVVAER
FNVLWLLRLF QTVALRLNSL IGFSLLIFIF LAMGLLEAEA FSKNLRTVGG EAGERLIAAG
AATARKFRRY MLVRTVASIL TGLIVWGFAT LVGLELAAAW GVISFALNYI PFIGPLIATV
LPALFGFAQT GSWETGLLIL AVLTLVQFLI GSYFEPLFTA KTLSISPFAV VFAVFFWGFI
WGLPGTFIGV PILIACVTVC EQFPASRWLA ILLSGKAEDR KPPVG