Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_0998 |
Symbol | |
ID | 7093677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 1079466 |
End bp | 1081676 |
Gene Length | 2211 bp |
Protein Length | 736 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643464337 |
Product | (p)ppGpp synthetase I, SpoT/RelA |
Protein accession | YP_002361329 |
Protein GI | 217977182 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.0223153 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCAAT ATGAACTCGT CGACCGGGTG CGGCGCTATA ATCCGCAGGC CGACGAAATA TTGCTCAATC GGGCCTATGT TTACGCGATG AAGGCGCATG GCTCGCAAAA GCGAGCCTCG GGCGATCCCT ATTTCTCCCA TCCGCTCGAA GTCGCCGCGA TCCTCACCGA CATGAAGCTC GACGATGCGA CGATCGTCGC CGCCGTGCTG CATGACACGA TCGAAGACAC CGACTCGACG CGTGAAGAGA TCGACCGGCT GTTCGGCCAG GATATCGGCC GTCTCGTTGA TGGGCTGACC AAGCTCAAGA AGCTCGATCT CGTCTCGAAA AAGGCGGCGC ACGCCGAGAA CTTCCGCAAG CTCCTGCTCG CCATCGCGCA AGATGTCCGC GTGCTCCTCG TCAAGCTCGC GGACAGGCTG CACAATATGC GCACGCTGCA TTTCGTGCCG CCGGAAAAGC GCGAGCGGAT CGCCGAGGAG ACGCTCGACA TCTACGCGCC TCTCGCCGGC CGGATGGGCA TGCAGGGGAT GCGCGACGAG CTGGAAGACC TCGCCTTCCG CCATCTGATG CCGGAAGCCT ATGCGACGAT CGAGGCGCGC CTCGACGAGT TCCGGCGCAA GAACGGCAAG GCCATCGCCA CCATCGAGAA AGAATTCGTC GATGAACTCG CGGCTCATGG CATCAAGGCC AAGGTCGCCG GACGCGAAAA GCAGCCCTAT TCCGTCTGGC GCAAGATGGA GCGCAAATCG ATCGCCTTCG AGCAGCTGTC CGACATCTTC GGCTTTCGCG TCGTCGTCGA AACGGTCGAG GATTGCTATC GCGTGATCGG CGCGGTCCAT ACCAAATGGG CCGTCGTTCC AGGCCGCTTC AAGGACTATA TTTCAACCCC GAAGCCGAAC GACTATCAGT CGATCCACAC CACAGTGGTC GGGCCGGGCC GGCAGCGCGT CGAATTGCAG GTGCGCACGG AAGCGATGCA GGACATCGCC CGCAACGGCA TCGCCGCTCA CGCCCTCTAC AAGGACGGCC GCATCGCCGA CCGCGAGACG CTGACCGGCG AGAGCCGCGC CTATCAATGG CTGCGCCGCA CGATCGAGAT GCTCGCCGAG GGCGACACGC CGGAAGAATT TCTCGAGCAC ACCAAGCTCG AACTGTTTCA CGATCAGGTG TTTTGTTTCT CGCCGAAAGG CCGCCTGATC GCTCTCCCGC GCGGCGCCAA CGCCATCGAT TTCGCCTATG CGGTTCACAC CGACGTCGGC AATACCGCGG TCGGCGCGAA GATCAACGGC CGCCATGCGC CGCTGGTCTC CGAGCTTCAG AACGGCGACG AGGTCGAGAT CACGCGGGCC GAAGGCCAGG TCCCGCCGGC GGCCTGGGAG TCGCTGGTGG TCACCGGCAA GGCGCGTTCG GCGATCCGCC GGGCGACGCG CGAAGCCGTG CGGGCGCAAT ATGCCGGGCT TGGCCGCCAG ATTGTCGCGC GCGCCTTCGA GCGCGCCGGA AAGCCCTATT CCGAGGAACG GCTGAAGCCC GTGCTGGCGC GCCTCGCCAG AGCGAATGTC GAGGACGTGC TCGCCGCCGT CGGACGCGGC GAAATGTTTT CAGGCGACGT CGTCAAGGCA GTTTACCCCG ATTTCAAGGA GGAGCGGAAA GCCGCCGCCG CGGCGCGCCC GCATGGCGAG GCCGGCTGGT TCGGCATGAA GAAGGCGGCG GGCCTCGTCT TCAAAATTCC CGGCGAGGGC GGCGACCAGC AGAACGATCA ATCGATCCCG ATTCGCGGCC TTCAGGGCGA TCTTCCGGTG CGCTTCGCGC CGAACGGCGG CGCCGTGCCC GGCGACCGCA TCGTCGGCAT ACTGACGCCC GGCGAAGGCA TCACCATCTA TCCGATCCAG TCGCCGGCGC TGACCGACTT TGACGAGCAG CCGGAGCGCT GGCTCGACGT GCGCTGGGAC GTCGAGGAGG GAACGCATGA ATTCTTTCCG GCGCGCATCG TCGTCACCGT CATCAATGAG CCGGGCGCGC TTGGCACGAT TTCAACCGTC ATCGGCGACA ATGACGCCAA CATCGACAAT ATCGTGTTCC GGCCGCTGTC GGCCGATTTC CGCGAAATGA CCATCGACGT CGAGGTCAAC GATCTGAAGC ATCTCAACGC CATCATCTCG AATTTGCGCG CGCGTTCGGT GGTGAGCAAG GTCGAGCGCG TAAACGCCTG A
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Protein sequence | MRQYELVDRV RRYNPQADEI LLNRAYVYAM KAHGSQKRAS GDPYFSHPLE VAAILTDMKL DDATIVAAVL HDTIEDTDST REEIDRLFGQ DIGRLVDGLT KLKKLDLVSK KAAHAENFRK LLLAIAQDVR VLLVKLADRL HNMRTLHFVP PEKRERIAEE TLDIYAPLAG RMGMQGMRDE LEDLAFRHLM PEAYATIEAR LDEFRRKNGK AIATIEKEFV DELAAHGIKA KVAGREKQPY SVWRKMERKS IAFEQLSDIF GFRVVVETVE DCYRVIGAVH TKWAVVPGRF KDYISTPKPN DYQSIHTTVV GPGRQRVELQ VRTEAMQDIA RNGIAAHALY KDGRIADRET LTGESRAYQW LRRTIEMLAE GDTPEEFLEH TKLELFHDQV FCFSPKGRLI ALPRGANAID FAYAVHTDVG NTAVGAKING RHAPLVSELQ NGDEVEITRA EGQVPPAAWE SLVVTGKARS AIRRATREAV RAQYAGLGRQ IVARAFERAG KPYSEERLKP VLARLARANV EDVLAAVGRG EMFSGDVVKA VYPDFKEERK AAAAARPHGE AGWFGMKKAA GLVFKIPGEG GDQQNDQSIP IRGLQGDLPV RFAPNGGAVP GDRIVGILTP GEGITIYPIQ SPALTDFDEQ PERWLDVRWD VEEGTHEFFP ARIVVTVINE PGALGTISTV IGDNDANIDN IVFRPLSADF REMTIDVEVN DLKHLNAIIS NLRARSVVSK VERVNA
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