Gene Msil_0998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0998 
Symbol 
ID7093677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp1079466 
End bp1081676 
Gene Length2211 bp 
Protein Length736 aa 
Translation table11 
GC content64% 
IMG OID643464337 
Product(p)ppGpp synthetase I, SpoT/RelA 
Protein accessionYP_002361329 
Protein GI217977182 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID[TIGR00691] (p)ppGpp synthetase, RelA/SpoT family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0223153 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCAAT ATGAACTCGT CGACCGGGTG CGGCGCTATA ATCCGCAGGC CGACGAAATA 
TTGCTCAATC GGGCCTATGT TTACGCGATG AAGGCGCATG GCTCGCAAAA GCGAGCCTCG
GGCGATCCCT ATTTCTCCCA TCCGCTCGAA GTCGCCGCGA TCCTCACCGA CATGAAGCTC
GACGATGCGA CGATCGTCGC CGCCGTGCTG CATGACACGA TCGAAGACAC CGACTCGACG
CGTGAAGAGA TCGACCGGCT GTTCGGCCAG GATATCGGCC GTCTCGTTGA TGGGCTGACC
AAGCTCAAGA AGCTCGATCT CGTCTCGAAA AAGGCGGCGC ACGCCGAGAA CTTCCGCAAG
CTCCTGCTCG CCATCGCGCA AGATGTCCGC GTGCTCCTCG TCAAGCTCGC GGACAGGCTG
CACAATATGC GCACGCTGCA TTTCGTGCCG CCGGAAAAGC GCGAGCGGAT CGCCGAGGAG
ACGCTCGACA TCTACGCGCC TCTCGCCGGC CGGATGGGCA TGCAGGGGAT GCGCGACGAG
CTGGAAGACC TCGCCTTCCG CCATCTGATG CCGGAAGCCT ATGCGACGAT CGAGGCGCGC
CTCGACGAGT TCCGGCGCAA GAACGGCAAG GCCATCGCCA CCATCGAGAA AGAATTCGTC
GATGAACTCG CGGCTCATGG CATCAAGGCC AAGGTCGCCG GACGCGAAAA GCAGCCCTAT
TCCGTCTGGC GCAAGATGGA GCGCAAATCG ATCGCCTTCG AGCAGCTGTC CGACATCTTC
GGCTTTCGCG TCGTCGTCGA AACGGTCGAG GATTGCTATC GCGTGATCGG CGCGGTCCAT
ACCAAATGGG CCGTCGTTCC AGGCCGCTTC AAGGACTATA TTTCAACCCC GAAGCCGAAC
GACTATCAGT CGATCCACAC CACAGTGGTC GGGCCGGGCC GGCAGCGCGT CGAATTGCAG
GTGCGCACGG AAGCGATGCA GGACATCGCC CGCAACGGCA TCGCCGCTCA CGCCCTCTAC
AAGGACGGCC GCATCGCCGA CCGCGAGACG CTGACCGGCG AGAGCCGCGC CTATCAATGG
CTGCGCCGCA CGATCGAGAT GCTCGCCGAG GGCGACACGC CGGAAGAATT TCTCGAGCAC
ACCAAGCTCG AACTGTTTCA CGATCAGGTG TTTTGTTTCT CGCCGAAAGG CCGCCTGATC
GCTCTCCCGC GCGGCGCCAA CGCCATCGAT TTCGCCTATG CGGTTCACAC CGACGTCGGC
AATACCGCGG TCGGCGCGAA GATCAACGGC CGCCATGCGC CGCTGGTCTC CGAGCTTCAG
AACGGCGACG AGGTCGAGAT CACGCGGGCC GAAGGCCAGG TCCCGCCGGC GGCCTGGGAG
TCGCTGGTGG TCACCGGCAA GGCGCGTTCG GCGATCCGCC GGGCGACGCG CGAAGCCGTG
CGGGCGCAAT ATGCCGGGCT TGGCCGCCAG ATTGTCGCGC GCGCCTTCGA GCGCGCCGGA
AAGCCCTATT CCGAGGAACG GCTGAAGCCC GTGCTGGCGC GCCTCGCCAG AGCGAATGTC
GAGGACGTGC TCGCCGCCGT CGGACGCGGC GAAATGTTTT CAGGCGACGT CGTCAAGGCA
GTTTACCCCG ATTTCAAGGA GGAGCGGAAA GCCGCCGCCG CGGCGCGCCC GCATGGCGAG
GCCGGCTGGT TCGGCATGAA GAAGGCGGCG GGCCTCGTCT TCAAAATTCC CGGCGAGGGC
GGCGACCAGC AGAACGATCA ATCGATCCCG ATTCGCGGCC TTCAGGGCGA TCTTCCGGTG
CGCTTCGCGC CGAACGGCGG CGCCGTGCCC GGCGACCGCA TCGTCGGCAT ACTGACGCCC
GGCGAAGGCA TCACCATCTA TCCGATCCAG TCGCCGGCGC TGACCGACTT TGACGAGCAG
CCGGAGCGCT GGCTCGACGT GCGCTGGGAC GTCGAGGAGG GAACGCATGA ATTCTTTCCG
GCGCGCATCG TCGTCACCGT CATCAATGAG CCGGGCGCGC TTGGCACGAT TTCAACCGTC
ATCGGCGACA ATGACGCCAA CATCGACAAT ATCGTGTTCC GGCCGCTGTC GGCCGATTTC
CGCGAAATGA CCATCGACGT CGAGGTCAAC GATCTGAAGC ATCTCAACGC CATCATCTCG
AATTTGCGCG CGCGTTCGGT GGTGAGCAAG GTCGAGCGCG TAAACGCCTG A
 
Protein sequence
MRQYELVDRV RRYNPQADEI LLNRAYVYAM KAHGSQKRAS GDPYFSHPLE VAAILTDMKL 
DDATIVAAVL HDTIEDTDST REEIDRLFGQ DIGRLVDGLT KLKKLDLVSK KAAHAENFRK
LLLAIAQDVR VLLVKLADRL HNMRTLHFVP PEKRERIAEE TLDIYAPLAG RMGMQGMRDE
LEDLAFRHLM PEAYATIEAR LDEFRRKNGK AIATIEKEFV DELAAHGIKA KVAGREKQPY
SVWRKMERKS IAFEQLSDIF GFRVVVETVE DCYRVIGAVH TKWAVVPGRF KDYISTPKPN
DYQSIHTTVV GPGRQRVELQ VRTEAMQDIA RNGIAAHALY KDGRIADRET LTGESRAYQW
LRRTIEMLAE GDTPEEFLEH TKLELFHDQV FCFSPKGRLI ALPRGANAID FAYAVHTDVG
NTAVGAKING RHAPLVSELQ NGDEVEITRA EGQVPPAAWE SLVVTGKARS AIRRATREAV
RAQYAGLGRQ IVARAFERAG KPYSEERLKP VLARLARANV EDVLAAVGRG EMFSGDVVKA
VYPDFKEERK AAAAARPHGE AGWFGMKKAA GLVFKIPGEG GDQQNDQSIP IRGLQGDLPV
RFAPNGGAVP GDRIVGILTP GEGITIYPIQ SPALTDFDEQ PERWLDVRWD VEEGTHEFFP
ARIVVTVINE PGALGTISTV IGDNDANIDN IVFRPLSADF REMTIDVEVN DLKHLNAIIS
NLRARSVVSK VERVNA