Gene Msil_0987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0987 
Symbol 
ID7093666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp1069121 
End bp1070266 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content64% 
IMG OID643464326 
Productglycosyl transferase family 9 
Protein accessionYP_002361318 
Protein GI217977171 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.00906939 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGAACC AGGTCGACGC CTTGAACAAA GTCACCGTCG ATGATGCCGG GCTGCTCAAA 
ACCTATCAGG AACAGGACGA GCCGGACGCA GCAGCCGCCG GCCAAGACGC GAGCAAAGCC
CGTCGGCGCA TCTTGATCTA CCGAATTGGC AGCCTTGGCG ATACGGTCGT CGCTTTGCCC
TGTTTCCACA AGCTGGCGGA AGCGTTTCCC GACGCCGAGC GCTATGTCTT GACCAATGTC
CCGGTCTCCA AAAAGGCCGC CGCGCTCGAA CTGATCCTTG GCGGATCGGG TCTCATCCAT
GGCGTTGTCG ATTATCCGAT CAAGACGCGC TCGATCCGCG AAATGTGGAA ATTGTCGCGG
CGCCTCAAGG CGCTCGAGGC GACGACGCTG GTCTATCTGA CGCCGCGGCT CAATCGCTTG
CTCGTCATTC GCGACATATT GTTTTTCCGC TTCAGCGGCA TCAAGCGCAT CATCGGCGCT
CCGCTCGCGC CGGATGTTCA GATCCTCATT CATGATGCGG AAGGCTTTGG CGCGATGGAA
AGCGTGCGGC TTGCGCGCAC CCTTAGAGAG CTGGGGCCAA TCGATCTCGA CGACCGCAAG
AATTGGGATC TCAAGGTCAC GGACGTAGAA AAAGAGGCCG GGGAGGCCGC TCTTGCGCCT
TTCGGGGGCG GCCGCTTCAT CGGCGTGAAC ATGGGCGGCA AGTCCGCAGC CAATCATTGG
GGCGAGGAGA ACTGGCGCCG GCTGCTGAAG GATCTTGCCC TTACCCATGG CGGCTACGGG
CTGCTGTTCC TTGGCGCCGC CGACGAGGCC GGAGCGGTGG AGAAGGTGAC GCCCGGATGG
CCGGGGATGA TCGTCAACGC CTGCGGTCAA CTGGCGCCGC GCGAAAGCGC CGCGGCGCTA
GCCCGGGCGA GCCTGTTTGT CGGGCATGAT TCGGGGCCGA TGCATCTTGC CGCCGCCATG
GGCGTGACCT GCGTCGCGCC TTTCGGCGCT CTGAACCGGC CGCGCCGCTG GCATCCCTAT
GGGCCCAATC ATCGAATCAT TCACCGCCTC GACGGCATCG ACAAGGTTCG CGTCGAGGAG
ATGGCCCATG AGGTGCGCGA CGTTCTCCCG GGGCTTGCCG CCGGCGGCCC GAACGCCGGC
ACGTAA
 
Protein sequence
MPNQVDALNK VTVDDAGLLK TYQEQDEPDA AAAGQDASKA RRRILIYRIG SLGDTVVALP 
CFHKLAEAFP DAERYVLTNV PVSKKAAALE LILGGSGLIH GVVDYPIKTR SIREMWKLSR
RLKALEATTL VYLTPRLNRL LVIRDILFFR FSGIKRIIGA PLAPDVQILI HDAEGFGAME
SVRLARTLRE LGPIDLDDRK NWDLKVTDVE KEAGEAALAP FGGGRFIGVN MGGKSAANHW
GEENWRRLLK DLALTHGGYG LLFLGAADEA GAVEKVTPGW PGMIVNACGQ LAPRESAAAL
ARASLFVGHD SGPMHLAAAM GVTCVAPFGA LNRPRRWHPY GPNHRIIHRL DGIDKVRVEE
MAHEVRDVLP GLAAGGPNAG T