Gene Msil_0972 details

Gene Information

• Locus tag: Msil_0972
• ID: 7093651
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylocella silvestris BL2
• Kingdom: Bacteria
• Replicon accession: NC_011666
• Strand: +
• Start bp: 1056981
• End bp: 1058861
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 643464311
• Product: ABC transporter related
• Protein accession: YP_002361303
• Protein GI: 217977156
• COG category: [R] General function prediction only
• COG ID: [COG0488] ATPase components of ABC transporters with duplicated ATPase domains

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 28
• Fosmid unclonability p-value: 0.0066159
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGCTTCACA TCAATGACGT CACGCTGCGG CTCGGACCGC GCGTTCTGTT CGACAAGGCG 
AGCGCCGCTT TGCCCGACGG ATCTCGCGTC GGCTTCGTCG GCCGCAACGG GGCCGGCAAG 
ACGACCTTGT TCAAGATCAT TTCAGGCGAG CTCCACCCCG AATCGGGCGA GGTCTCCTAT 
CCGCGCCAGA TGCGCCTAGG CCGAGTCGAG CAGGAGGCGC CGGGCGGTCC GCAATCGCTG 
ATCGATTTCG TGCTCGACGC CGACGTCGAG CGCGCCGCGC TGATGCGCGA GGCCGAGACC 
GCCGCGGACC CCGGCCGCAT CGCAGACATT CACTTGCGCC TCGTCGACAT CGACGCCCAT 
GCGGCGCCCG CGAAGGCGGC CGGCATTCTC GCCGGCCTTG GCTTCGACGA GGCGGCGCAG 
GCAAAGCCCC TGTCGGAATT CTCGGGCGGC TGGCGCATGC GCGTCGCCCT CGCGGCGGTG 
CTGTTTTCCG CCCCCGACCT GCTTCTGCTC GACGAGCCGA CCAATTATCT CGATCTCGAA 
GGCACGCTCT GGCTGATCGA TTATCTGCAA CGCTACCCGG CGACAATTCT CGTCATTAGC 
CATGACCGCG ACCTGCTCGA TGCTGTTTCG GATCATATTC TGCATCTTGA CTCCGCCAAG 
CTGACCCTCT GGCGCGGCAA TTATTCGAGC TTCGAGAAGC AGCGCCGCGA ACAACAGGCC 
ATTCTTGTGA AGCACAAGAA GAAGCAGGAC GATCAGCGCA AACATTTGCA AGCATTCGTC 
GACCGCTTCC GCGCCAAGGC GACAAAGGCG GCGCAGGCGC AATCGCGCCT CAAGATGCTG 
GCCAAGATGG AGCCGATCGC GGCGATCGTC GACGGGCACA TTCTGCCCTT CTATCTGCCC 
TCGCCGGCAA AGCCGCTCAA TCCGCCGATC GTCGCCATGG ACGACGCCAG CGTCGGCTAT 
GGCGAGACGC CTGTGCTGCG CCATCTCTCC CTCAATATCG CCGAGGACGA CCGCATCGGC 
CTGCTCGGAT CGAACGGCAA CGGCAAATCC ACCTTCGCCA AGCTCGTCGC CGGACGGCTC 
TCGCCGCTTT CCGGCGTCGT GCGGCGCTCC TCGAAGCTCG ACGTCGGATT TTTCGCCCAG 
CATCAGGTTG ACGATCTCGA CGAGAAGGCG ACGCCCTATC AATGCGTCGC CGACCATATG 
CGCGACGCGA CCGAAGCCAA GATCCGCGCC AAATGCGCCC AGTTCGGATT TCCGAACGTC 
AAGGCCGACA CAAAAATCGC TCAGCTCTCC GGCGGCGAAA AGGCCCGGCT GCTGATGGGC 
CTCGCCGCCT TCAACGGGCC GCATCTCCTG ATCCTCGACG AGCCGACGAA CCATCTCGAC 
ATCGACAGCC GCGGCGCCCT GATCGAGGCG ATCAACGATT ATGAAGGCGC CGTCATTCTC 
GTCTCGCATG ACCCCCATCT GCTGGAGGCC TGCGCCGACC GCCTCTGGCT CGTCGCCGAG 
GGGACGGTGA CCTCCTTCGA CGGCGACGTC GACGACTATA AGAAATTCAT CCTCGATCGC 
ACCGGCGCAG GGTCGGGCAA GGGAAGGAAA GAGCGTCAGG CCAAGGCGGA CAACGCCCCG 
CGCGAACCCG CGCCGATCCG CGTCAAGGAT CCGGGGCCGC TGAAGAAACG CATCGCCGCC 
GCCGAGGAGA AAATGCGCAA ATTCCAGGAT CTCGCGGATC GCATCGACAA GGCGTTGGCC 
AATCCGGCGA GCTTTTCCAA GGATCCCGCC AAGGCGGCGC AGCTGTCCGC GCAGCGCGGC 
GAACTGGAAA AAGCGCTGCG CGCCGTCGAG GAAGAATGGC TGGAGTTGAC CGGCCAGTTC 
GAGGCGGCCC AGACGGCGTG A 

 

Protein sequence

MLHINDVTLR LGPRVLFDKA SAALPDGSRV GFVGRNGAGK TTLFKIISGE LHPESGEVSY 
PRQMRLGRVE QEAPGGPQSL IDFVLDADVE RAALMREAET AADPGRIADI HLRLVDIDAH 
AAPAKAAGIL AGLGFDEAAQ AKPLSEFSGG WRMRVALAAV LFSAPDLLLL DEPTNYLDLE 
GTLWLIDYLQ RYPATILVIS HDRDLLDAVS DHILHLDSAK LTLWRGNYSS FEKQRREQQA 
ILVKHKKKQD DQRKHLQAFV DRFRAKATKA AQAQSRLKML AKMEPIAAIV DGHILPFYLP 
SPAKPLNPPI VAMDDASVGY GETPVLRHLS LNIAEDDRIG LLGSNGNGKS TFAKLVAGRL 
SPLSGVVRRS SKLDVGFFAQ HQVDDLDEKA TPYQCVADHM RDATEAKIRA KCAQFGFPNV 
KADTKIAQLS GGEKARLLMG LAAFNGPHLL ILDEPTNHLD IDSRGALIEA INDYEGAVIL 
VSHDPHLLEA CADRLWLVAE GTVTSFDGDV DDYKKFILDR TGAGSGKGRK ERQAKADNAP 
REPAPIRVKD PGPLKKRIAA AEEKMRKFQD LADRIDKALA NPASFSKDPA KAAQLSAQRG 
ELEKALRAVE EEWLELTGQF EAAQTA