| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0967 |
|---|
| Symbol | |
|---|
| ID | 7093646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 1052928 |
|---|
| End bp | 1053872 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643464306 |
|---|
| Product | aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein |
|---|
| Protein accession | YP_002361298 |
|---|
| Protein GI | 217977151 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.00256112 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCACCGCC GACATTTTCT CAGCGCCGCC CTTGGCGGAG CGATCGCCGC GCTGGCCATC
GAAGCGAAAG CCGCCGAGCT GAAGGAAATC CGTATCGGAT TTCAAAAGGC GGGCGTCCTG
TTCGCGTTCA AACAGCGCCG CACGCTGGAG ATTGCATTCG AACCGCAGAA CATCGCCATC
AAATGGATCG AATTTCCATT CGGGCCGCCG ATCCTCGAGG CGCTCGCGAC AGGCAGCGTC
GATTTCGGCT TCACCGGCGA CGCCCCGCCG ATCTTCTCGC AGGCGGCGGG GGCCGATCTG
CTTTATGTCG CAGCTCTGCC GAGAAATTCG ATCGAGGGAA TCGTCGTGCG CGCGGATTCG
GCGATCCGAG CCATCGCCGA TCTCAAGGGC AAGGCGATCG CCATTCCGAA GGGTTCGAGC
GCGCATAACA TGACGATCGC CGCGCTGGAG ACGGTCGGGC TTTCGTTCAA CGATATCAAG
CCGGTCTATC TCGCCCCGGC CGATGGATTC GCCGCCTTTT CGCGCGGCAG CGTCGACGCC
TGGACGATCT GGGATCCCTA TTTCGCGCTC GCCCAAAAGG CCGGCGCGCG CGTCGTCGCG
CTGAACACCG AGGTCGAACA GCCCTCGCAA TTCTTCCTCG CCGCCAAAAG CTTCGCGCAG
GCCCATCCGC AGACGCTGAC CAAGCTCATC GACGTCTTCG CCCGTGAGCT TGCCTGGGCC
CGCGCGCATC GCCCCGAACT GGCGCAGGCC ATCCACGATG CAACAGGCAT CGATCAAGAA
GCGATTCTCA AGGCCGTGCA GCGCGCGGAC CTCGACGTCG TCCCGCTGAA TGAGCAGATC
GTCGCCAATC AGCAAGCCGC GGCGGATCGC TTTTTCAGGG CCGGGCTCAT TCCAAAGCAA
ATCGCCGTTC GCGACATCAT CTGGACCTGG ACGCCAAGCT CCTGA
|
|---|
| Protein sequence | MHRRHFLSAA LGGAIAALAI EAKAAELKEI RIGFQKAGVL FAFKQRRTLE IAFEPQNIAI
KWIEFPFGPP ILEALATGSV DFGFTGDAPP IFSQAAGADL LYVAALPRNS IEGIVVRADS
AIRAIADLKG KAIAIPKGSS AHNMTIAALE TVGLSFNDIK PVYLAPADGF AAFSRGSVDA
WTIWDPYFAL AQKAGARVVA LNTEVEQPSQ FFLAAKSFAQ AHPQTLTKLI DVFARELAWA
RAHRPELAQA IHDATGIDQE AILKAVQRAD LDVVPLNEQI VANQQAAADR FFRAGLIPKQ
IAVRDIIWTW TPSS
|
|---|
| |