Gene Msil_0923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0923 
Symbol 
ID7092326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp1009151 
End bp1009897 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content65% 
IMG OID643464262 
Productprotein TolQ 
Protein accessionYP_002361254 
Protein GI217977107 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02796] TolQ protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.130209 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCAG CCGATATTGC GGCGACCGGC GTGGCCGCGA CGGGTTTCGC CCAGGGGAGC 
GAGGTTTCCC TTCTGTCGAT GTTCTGGTCG GCGCATATCG TCGTCAAGCT TGTCATGCTC
GGCCTACTGG CGGCCTCCGT CTGGTGCTGG GCGATCATCA TCAACAAGGT GATCCTGCTG
CGCAGGACAC AGCGGGCGAT CGATCAGTTC GAGGAAGTGT TCTGGTCCGG CGCCTCGCTC
GACGAGCTTT ATACGACGCT CTCGGCGCGC CCGACCTCCG GCATGGCGAG CCTGTTCGTC
GCCGCCATGC GCGAATGGCG ACGCTCGGTG CAGGGGGCCG CGACCTCCAC CTTCATGGGC
TTGCAGGCTC GAATCGAGAA GGTGCTCGAC GTCTCGATCG CGCGCGAGGT CGAAAAGCTC
GAATCCAACC TTTTGGTGCT GGCGACGGTC GCCTCCGCCA GCCCCTTCAT CGGCCTTTTC
GGCACGGTCT GGGGCATCAT GTCGTCGTTT CGTTCGATTG CGGCGTCGCG CAACACCTCG
CTCGCCGTCG TCGCGCCGGG CATCGCCGAG GCGCTGTTTG CGACCGCGAT CGGTCTTTTC
GCCGCCATTC CGGCGCTGAT CGCCTATAAC AAGCTGCAAG GCGACGTCGC CAAGAAGCAG
GCCCAGCTCG AGGGCTTCGC CGACGAGTTC TCATCGATCC TGTCGCGCCA GATCGATCAG
CGCGCCGCCC ACGACCAGGC GGCGTGA
 
Protein sequence
MNPADIAATG VAATGFAQGS EVSLLSMFWS AHIVVKLVML GLLAASVWCW AIIINKVILL 
RRTQRAIDQF EEVFWSGASL DELYTTLSAR PTSGMASLFV AAMREWRRSV QGAATSTFMG
LQARIEKVLD VSIAREVEKL ESNLLVLATV ASASPFIGLF GTVWGIMSSF RSIAASRNTS
LAVVAPGIAE ALFATAIGLF AAIPALIAYN KLQGDVAKKQ AQLEGFADEF SSILSRQIDQ
RAAHDQAA