Gene Msil_0922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0922 
Symbol 
ID7093357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand- 
Start bp1008574 
End bp1009020 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content61% 
IMG OID643464261 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_002361253 
Protein GI217977106 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02801] TolR protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.219154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATGT CGACAATTGC TGGACGCAAG GGCGGGCGCG GGCGCCGCGG CTCGCCGCGC 
TACCGGCCGA TGGCCGACAT CAACATGACG CCGTTCATCG ACGTCATGCT GGTGCTTCTG 
ATCATCTTCA TGGTGGCGGC GCCCTTGCTC GCGACCGGGG TCGCGATCGA TCTGCCGCAA 
ACCAAATCGG CGGCGCTCAA TGTCGAACAG AAGCCCCTGT CTGTCGCGGT CGACGACAAG 
GGCGCGGTCT TCGTCATGGA TGAGCCGGTT GATATGGCCA AGCTTGCCGA CAAGCTGAAA 
GAGCTCGCCA AATCCGGTTT CGACGAGCGC ATTTATGTCC GCGGCGCCAA TCAGGTGAAT 
TACGGCAAGA TCGCCGAGGT GATGTCGATC ATCACGACCG CCGGATTCAA GAAGGTCGCC 
CTCGTCACCG ATCCGAGCAA GACCTGA
 
Protein sequence
MAMSTIAGRK GGRGRRGSPR YRPMADINMT PFIDVMLVLL IIFMVAAPLL ATGVAIDLPQ 
TKSAALNVEQ KPLSVAVDDK GAVFVMDEPV DMAKLADKLK ELAKSGFDER IYVRGANQVN 
YGKIAEVMSI ITTAGFKKVA LVTDPSKT