Gene Msil_0893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0893 
Symbol 
ID7093327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp980773 
End bp982032 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content65% 
IMG OID643464232 
Product3-oxoacyl-(acyl-carrier-protein) synthase 2 
Protein accessionYP_002361225 
Protein GI217977078 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.112167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAGAG TGGTCATCAC CGGTGTTGGC ATGGTTTCGC CGCTCGCTTG CGGCAGCGAA 
GCCACGTGGA CGCGGCTGCT CGACGGGCAA AGCGGCGCGC GCATAATCAC GGAATTCGAC
ACCTCCGACC TTCCCTGCAA GATCGCGATG CCCGTCCCGC GCGGGGACGG CCAGAACGGC
AGCTTCAATC CCGATGAATG GATGGAGCCG AAGGAGCAGC GCAAGGTCGA TCAATTCATC
ATCTATGCCA TCTCCGCGGC GACGCAGGCG CTGAATGACG CAGGCTGGAA GCCGACCAGC
TACCAGGATC AAATCGAGAC AGGCGTTCTG ATCGGATCGG GCATCGGCGG TCTGACCGGC
ATCGCCGAGA CCGCCGTCAT CCTGCATGAG CGGGGCGCGC GGCGCGTATC GCCCTTCTTC
ATTCCCGGCC GGCTGATCAA TCTCGCCGGC GGCTATGTCT CCATCCAGCA TGGCCTGCGC
GGGCCAAATC ATGCGGTGGT CACGGCTTGC TCCACGGGCG CCCACGCCAT TGGCGATGCG
GCGCGGCTGA TCCAGTTCGG CGACGCCGAA GTGATGGTCG CTGGGGGCGC CGAATCGCCG
ATCAGCCGCA TCGGGGTCGC GGGCTTTGCC GCCTGCCGCG CGCTCTCGAC CGGCTTCAAC
GATCGGCCGA AACAGGCGTC CCGGCCCTAT GACAAGGATC GCGACGGCTT TGTCGTCGGC
GAGGGCGCGG GCTGCGTCGT GCTCGAGGCC TATGAGCACG CCAAGGCGAG GGGCGCGCGG
ATCTACGCCG AAATCATCGG CTATGGCATG TCGGGCGACG CCTATCACAT CACCGCGCCG
CAGCCGACCG GCGACGGCGC CTTTCGGGCG ATGAGCGCGG CGATCAAGCG CGCCGGCGTT
TCCCCGCTCG ACATCGACTA TATCAACGCG CATGGCACCT CGACGCCGCT CGGCGACGAG
ATTGAGCTGC AGGCGGTGCA GCGGCTTGTC GGCGATCCGA AGGGCCTTTC GATGTCGTCG
ACGAAGTCGG CGATCGGCCA TCTTCTCGGC GCGGCCGGCG CGGTCGAGGC GATTTTCTCC
GTCCTTGCCT TGCGCGACCA GATCGTCCCG CCGACGCTCA ATCTCGACAA TGCCTCGGTC
GACACAAAGA TTGACCTCGT GCCGCATAAG GCGCGAAAGC GAGAAGTCGA GTTCGTGCTG
TCGAATTCCT TCGGCTTTGG CGGCACCAAT GCATGTTTGA TCTTCAAGCA CGCCGAATAG
 
Protein sequence
MRRVVITGVG MVSPLACGSE ATWTRLLDGQ SGARIITEFD TSDLPCKIAM PVPRGDGQNG 
SFNPDEWMEP KEQRKVDQFI IYAISAATQA LNDAGWKPTS YQDQIETGVL IGSGIGGLTG
IAETAVILHE RGARRVSPFF IPGRLINLAG GYVSIQHGLR GPNHAVVTAC STGAHAIGDA
ARLIQFGDAE VMVAGGAESP ISRIGVAGFA ACRALSTGFN DRPKQASRPY DKDRDGFVVG
EGAGCVVLEA YEHAKARGAR IYAEIIGYGM SGDAYHITAP QPTGDGAFRA MSAAIKRAGV
SPLDIDYINA HGTSTPLGDE IELQAVQRLV GDPKGLSMSS TKSAIGHLLG AAGAVEAIFS
VLALRDQIVP PTLNLDNASV DTKIDLVPHK ARKREVEFVL SNSFGFGGTN ACLIFKHAE