Gene Msil_0826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0826 
Symbol 
ID7092684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp905491 
End bp906537 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content68% 
IMG OID643464163 
ProducttonB-system energizer ExbB 
Protein accessionYP_002361158 
Protein GI217977011 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02797] tonB-system energizer ExbB 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.038397 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGGT TGGAAATAGA CATGTCGCGG TCGGCAAATC GCGGTCGCGA TTTTTTGCGC 
GCACGATTTG CCGGCTTGGC GCTCGCGCTC GCTTTTGCCT CGGCGCCCCT GTGCGCGCAG
CCGGCGGCGA CGCAATCTTC CAGCCCGGCC GCCTCAGAAA CGCCGATCGC GGCTCCGGAC
GCGACGCCGG CGCAGCTCGG CCAAACATCC GCTGCGGCGC AGGCCAGCCC GCAAGCGCCG
GCGGTTATAG AAGCGCCTGC GGCCACCAAT GCGCCTGCGC CCGAACCCGC AAAAGCCGAA
CCGCAGCCAA GCGCCTCCCT TGCAGCGGCG ACCCCGGCCG ATCTCTCTCC CTGGGGCATG
TTCCTGCATG CCGACCGTAT CGTGAAAGGC GTGATGATCG GCCTCGCCTT TGCGTCCCTC
GTCACCTGGA CGATCTGGCT TGTGAAAAGC CTCGATCTGT GGCGGGCCCG CGCCTCGGCG
CGCAGGGACC TTGAAGCGGT CACCGAGGCC GAAGATCTCA GAGCGGCGCA AACGACGTTC
AAGGATCAGC GCTCGCCGGT CGCCCGCTTC GTCGAGGCTG CGCGGAGCGA GGAAGACCGT
TCGCGGGGGT TGCCGGCGGA GGGGGTCAAG GAGCGCATCG CGGCGCTTCT GGTCCGCCTC
GAGTCGCATG CCGGCCGAAA GATGGCGCGC GGAACCTCGG TGGTCGCGAC CATCGGCGCG
ACGGCCCCAT TCGTCGGCCT GTTCGGCACG GTGTGGGGCA TCATGGACAG CTTCATCGGC
ATATCAAAGT CCCATACCAC CAATCTCGCG GTCGTCGCCC CCGGCATCGC GGAGGCGCTG
CTGGCGACGG CGATGGGCCT CATCGCCGCC ATTCCGGCCG TCATGATCTA CAATGTCTTC
GCGCGCGGCA TCACCGGCTA CAAGGCGCAG CTCGGCGACG CGGCGGCGGA GGTTCTGCGC
CATGTCTCGC GCGATCTCGA CCGCGCCGCT CTGTCCGGCG ACGAGCCGGA CCGGCATGTC
ATCGCCATGC GCCGCCCGGC GGAGTAA
 
Protein sequence
MTRLEIDMSR SANRGRDFLR ARFAGLALAL AFASAPLCAQ PAATQSSSPA ASETPIAAPD 
ATPAQLGQTS AAAQASPQAP AVIEAPAATN APAPEPAKAE PQPSASLAAA TPADLSPWGM
FLHADRIVKG VMIGLAFASL VTWTIWLVKS LDLWRARASA RRDLEAVTEA EDLRAAQTTF
KDQRSPVARF VEAARSEEDR SRGLPAEGVK ERIAALLVRL ESHAGRKMAR GTSVVATIGA
TAPFVGLFGT VWGIMDSFIG ISKSHTTNLA VVAPGIAEAL LATAMGLIAA IPAVMIYNVF
ARGITGYKAQ LGDAAAEVLR HVSRDLDRAA LSGDEPDRHV IAMRRPAE