Gene Msil_0817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0817 
Symbol 
ID7092675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand- 
Start bp898760 
End bp899437 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content60% 
IMG OID643464154 
Productprotein of unknown function DUF1345 
Protein accessionYP_002361149 
Protein GI217977002 
COG category[S] Function unknown 
COG ID[COG4291] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.219154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTCGG TCAGCTATCC CTATCGCACC GTCCGCGGCC ATCCGCGGCT GTTCGCCGGC 
CTTGCCGCCA GCGCGCTCGC CTATTTTCTG GCGCCGTTTC CCGTTCACGC CACGCGCTTC 
CTCATTAGCT GGAACGTCGG CGCGCTGCTC TATTTTCTTC TTTCGACCCT GCTGATCCTG 
CGGGCGACGC CGGAATCGAT GCGCTGGCGC GCGAAGGAGA GCGACGAGGG GCGGTTCTTC 
ATTCTTGTCG TGACCTGTCT CGCCGCCAGC GCGTCCATGG CCGCGATCGT TGCTCAGCTC 
GGTTCGACGC AGGAGATGGA AGGGACACGG AAAGGGCTGC ATATCGCGCT GGCGGCGGCG 
ACGATTGTTT CCTCCTGGTT CTTCATCCAC CTGACCTTCG CGCTGCATTA CGCGCATGAA 
TATTTCGATG AACTCGACCA GGAGCCGGGC AGGGACCCAA AGCTTGCCGG CGGCCTTGAA 
TTTCCGGGAA CCGAAGACCC GGATTACTTC GATTTTCTCT ATTTCTCCTT CATCATCGGC 
GTCGCCTCGC AGACGGCGGA CGTGCAGATC ACCGGCAAGG AAATGCGCAG GGTGTCGCTG 
GTGCATTCGA TCATCGCGTT TTTCTTCAAC AGCGCGGTGC TGGCGCTGAC AATCAATATT 
GCGGCGGGGC TGATTTAG
 
Protein sequence
MVSVSYPYRT VRGHPRLFAG LAASALAYFL APFPVHATRF LISWNVGALL YFLLSTLLIL 
RATPESMRWR AKESDEGRFF ILVVTCLAAS ASMAAIVAQL GSTQEMEGTR KGLHIALAAA 
TIVSSWFFIH LTFALHYAHE YFDELDQEPG RDPKLAGGLE FPGTEDPDYF DFLYFSFIIG 
VASQTADVQI TGKEMRRVSL VHSIIAFFFN SAVLALTINI AAGLI