Gene Msil_0811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0811 
Symbol 
ID7092669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp891589 
End bp892374 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content62% 
IMG OID643464148 
Product3-hydroxybutyrate dehydrogenase 
Protein accessionYP_002361143 
Protein GI217976996 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.110445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTTA AATCCCGCAA CGCCATCGTC ACCGGGTCGA CCAGCGGCAT CGGGCTCGCC 
ATCGCCCGCG AATTCGCCAA GGACGGCGCC AATGTCACCA TCAACGGCCT CGGCGATGCG
GCGGCGATAG AGGCCGAACG CGCCAAGATC GAAGCGGATT TCGGCGTCAA GGCGGCCTAT
TCGCCGGCCA ATATGACCAA GCCGGAAGAA ATCCGCGCCA TGGTGACGGA CGCCGAAAAA
GCTTTTGGCA GCGTCGATAT TCTCGTCAAC AACGCCGGGA TCCAGCATGT CGCGCCGATC
GAGGATTTTC CGATCGATAC CTGGAACCTC ATCATCGCGA TCAATCTGTC CGCCGCTTTC
CACGCCATCG CCGCAGCCAT TCCCGGCATG AAGGCGCGCA AATGGGGCCG CATCATCTCG
ACCGCCTCGG CCCATTCCAA GGTCGCCTCG CCGTTCAAAT CCGCCTATGT TAGCGCCAAG
CACGGCATCG ACGGGCTGAC CAAGACGGCG GCGCTGGAGC TCGCGACCTT CGGCGTCACG
GTAAATTGCA TCTCTCCCGG CTATGTCTGG ACGCCTCTGG TCGAAAAGCA GATCCCCGAC
ACCATGGCCT CGCGCCATCT GACGCGCGAA CAGGTCATCA ATGACGTTCT CCTGACGGCG
CAGCCGACCA AGCAGTTCGT GACCGTCGAT CAGGTGGCGG CGCTGGCGGC GTTCCTCTGC
ACAGACGCGG CCTCGCAGAT CACCGGCTCG AATATTTCGA TCGACGGCGG ATGGACGGCC
GAATGA
 
Protein sequence
MTLKSRNAIV TGSTSGIGLA IAREFAKDGA NVTINGLGDA AAIEAERAKI EADFGVKAAY 
SPANMTKPEE IRAMVTDAEK AFGSVDILVN NAGIQHVAPI EDFPIDTWNL IIAINLSAAF
HAIAAAIPGM KARKWGRIIS TASAHSKVAS PFKSAYVSAK HGIDGLTKTA ALELATFGVT
VNCISPGYVW TPLVEKQIPD TMASRHLTRE QVINDVLLTA QPTKQFVTVD QVAALAAFLC
TDAASQITGS NISIDGGWTA E