Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_0799 |
Symbol | |
ID | 7092657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 878292 |
End bp | 880397 |
Gene Length | 2106 bp |
Protein Length | 701 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643464136 |
Product | ABC transporter related |
Protein accession | YP_002361131 |
Protein GI | 217976984 |
COG category | [R] General function prediction only |
COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.0267156 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTTTTC TCGCCGCCCT CGTCGCCGTT TTTTCGCTTG TCACTGGCGT CATCGGCGCG ATGCAACGGG ACGCGACTGT CCTGCTTCTG GCCGTCACGG GACTGATTTG CGCCTATACG ACGTTCAAAT CTCCGAAGAT TTCGAGCTTC CTGCAGATTT TCGCGGCGAT CTTCGCGGCC GAAACCGTGT TGTTCGGCGT CGTGTTCATG ATTTCGCAGG TCGGCATGTG GCCGGCCTCG CTCGCCGATT ACGTCCTGCC GGAGAGCCTG CCGCTCACCG TCGCGATCTT CGCCATCCTC GTTTACGCCA TTTCATTTAT TCCCGTCGTG CAGTCGATGA CGCGCATCGG CGACCGCTAT TTCGACGCGA GCGGGGCGAC CAGCGTCAAG ATCTGGCCGC TGCCGTCCTT TGTGATGAGA GAGCGCTGGC TCGCCATCAT GATGGTGGTC TTCCTCGTCG TCATCAATCA GGCCCAGGTC GGCATCCAGG TGCGCCTGTC GTTCTTCTCG CGCGACTGGT TCAACGCCAT CCAGAACAAG GACCAGGCCG CCTTCTGGTC GCAGCTCTTT ACCGTCTTCA CGCCCTGGGC CTTCATCTAT ATCGCTTCGG CGATCCTCGA ATTCGTCGTC GCCTCCACCT TGATCATCCG CTGGCGGCGC TGGCTTACCG AGGATTATGT CTCGCGCTGG CTCGACCGCC ATACGCATTA CCGCATGTCG CTCGCGGGCG GCCTCGCCGA CAACCCCGAC CAGCGCATCT CGGAGGACGT GAACCGCTTC ATCAACGGCG GTCAGGAAGG CTATGGAATC TATACCTTCT CGATCCTTTT GATCTCGAAC CTCTCTTCGC TCGTGTCCTT CGCGATCCTC CTCTGGGACC TGTCCGCCAA TTTCACCCTG CCCGGAACCT CGATCGCCGT GCCCGGATTC CTGTTCTGGG TGGCGCTGAT CTATGCCGGC TTCGGCACCT GGATCACGCA TCTCATCGGC CGCTCGCTGG TTCAGCTCTC CTTCGCGCGG CAGCGCTATG AGGCCGATTT TCGCTTCTCC CTCGCGCGTC TGCGCGAATA TGCCGAGCAG GTCGCGCTGC TCTCCGGCGA ATCCGCTGAG AAAGCCTCGC TCGGGCAGCG CTTCATGGCG ATCATCACCA ATTATTTTCA GATCGTGCGG GTGCGCAAGA ATCTGATCGG CTTTACCGCC TCCTATGGCC AGCTCAGCCC GATCATTCCC TATATCGTCG CGGCGCCCTT TTATTTCGCC GGAAAAATCA CGCTCGGCGT CATGACCCAG ACGGCGCGCG CTTTCGGCAG CGTCGACAGC GCGCTGACCT TCTTCGTGAC CTATTACGTC TCGCTCGCCG ATTTCAAAGC AGTGCTCGAC CGTCTGATTT CGTTCGACGC CTCGATCGAG GCCGTGCAGC CCCCCGGCGG AATTTTGCGC GCGATCACGT CCCCGTCGCG GACTCAAGAC ATCGGCCTCA CAGGCGTGAC GCTCAAACTT CCCGACGGAC GCGTGATCGT CAAAGACGTC AATCTGCAGC TGGCGGCTGG CGAGCCGACG CTGCTGACCG GCGCGTCCGG CTCCGGCAAA TCGACGCTGT TCCGGGCCAT TTCGGGCATA TGGCCGATCG GTGAGGGGAC GGTCTCGGCT CCCGACGGCG CGCGGCTGAT GCTGCTGCCG CAAAAGCCCT ATATCCCCAA CGGCACGCTG ATCGGCGCCG TCACCTATCC GGCCGCGCCC GACGCTTATG ATGAAGCCGA CGTCCGCGCG GCGCTGGCCG CGGCGAGCCT GCCGCATTTC GCCGATCAGC TCCATGTCGA CGACAATTGG GGCCAGCGTC TGTCCGGCGG CGAGCAGCAA CGCCTCGCCG TCGCCCGCGC CCTGCTCGCC AAGCCCGACT GGCTGTTCCT CGATGAGGCG ACCGCGTCGA TGGACGAAAA TCTGGAGACG AAAGTCTACG ATATTTTGTT CAAGGAGCTG CGCGAGACGA CGATCGTCTC GATCGGCCAT CGCTCCAGCC TGATCGAACG GCACAAGCGG CATATCGAAA TGCGCCCGGG AAGCGACGGC GCCTTCACGC TGGTCGAGAA TTCCGTCCCC GCGTGA
|
Protein sequence | MIFLAALVAV FSLVTGVIGA MQRDATVLLL AVTGLICAYT TFKSPKISSF LQIFAAIFAA ETVLFGVVFM ISQVGMWPAS LADYVLPESL PLTVAIFAIL VYAISFIPVV QSMTRIGDRY FDASGATSVK IWPLPSFVMR ERWLAIMMVV FLVVINQAQV GIQVRLSFFS RDWFNAIQNK DQAAFWSQLF TVFTPWAFIY IASAILEFVV ASTLIIRWRR WLTEDYVSRW LDRHTHYRMS LAGGLADNPD QRISEDVNRF INGGQEGYGI YTFSILLISN LSSLVSFAIL LWDLSANFTL PGTSIAVPGF LFWVALIYAG FGTWITHLIG RSLVQLSFAR QRYEADFRFS LARLREYAEQ VALLSGESAE KASLGQRFMA IITNYFQIVR VRKNLIGFTA SYGQLSPIIP YIVAAPFYFA GKITLGVMTQ TARAFGSVDS ALTFFVTYYV SLADFKAVLD RLISFDASIE AVQPPGGILR AITSPSRTQD IGLTGVTLKL PDGRVIVKDV NLQLAAGEPT LLTGASGSGK STLFRAISGI WPIGEGTVSA PDGARLMLLP QKPYIPNGTL IGAVTYPAAP DAYDEADVRA ALAAASLPHF ADQLHVDDNW GQRLSGGEQQ RLAVARALLA KPDWLFLDEA TASMDENLET KVYDILFKEL RETTIVSIGH RSSLIERHKR HIEMRPGSDG AFTLVENSVP A
|
| |