| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0729 |
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| Symbol | |
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| ID | 7091961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 802601 |
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| End bp | 805843 |
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| Gene Length | 3243 bp |
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| Protein Length | 1080 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643464065 |
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| Product | ribonuclease, Rne/Rng family |
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| Protein accession | YP_002361062 |
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| Protein GI | 217976915 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.410807 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAACA AAATGCTCAT CGACGCCTCC CACCCGGAGG AGACCCGCGT CGTCGTTCTC
CGCGGCAACC GCGTCGAGGA ATTTGACTTC GAATCCGCAA GCAAGAAGCA GCTTCGCGGA
AATATCTATC TTGCCAAGGT TACGAGGGTC GAGCCTTCGC TTCAGGCCGC CTTCGTCGAT
TACGGCGGCA ACCGCCACGG TTTCCTCGCC TTTTCGGAAA TCCACCCGGA TTATTATCAG
ATCCCCGTCG TCGACCGGCA GGCGCTGATC GAGGAAGAGG CGCGCGCGCA GCAACGCGAG
GCCGATGACG AAGAGTCCAG CCCGCGGCGC AGCCGCCGGC ATCGTCGCGG CGACCGTAAC
GGCGGCGATC GCAGCGGCAA TGGCGATCGT AACGGCAAGC GCGCCGAAAA GCGTTCCGGC
GACGCCGAGA CGCTGTCCGA ACCCTATGAG GCCTCGTCCG AGGAGACGCA GCAGTTCGAC
GCGGCCCAGG ACGACGCCGG AAGCCCAAAC CGCAACGAAG CGCGTGGCGA GGAACATGCC
GGAGAGCGTT TCGAGGCGGA GGCGCAGGAT CGCCGCGCCG AAGAGGCGCC TGGCGACGAT
TTCATGTCTT TTGAAGCCGT CTCAGACGAT GTCGAGCGGG ATTTCGAAGA TGCGCCGCCA
GCGGCCGCCT TCACCGCCGC GCCCGACGCC GTCCGGTCGA CCGAGGAAGC GTTTTCGCCA
GCTGGCGAGG ACGCGCAACA GGACGCCGAT CAGGCTGCGA GCGTTGCGGC CGACTCCCAT
GAGTCAGGCG CCTATGAAGA GCAGCCGGCT CCGCTTTTTG AGACGGGCGC GGCGGCGCCT
TATGCAGAAG CGGCCAGCGT GTCTCTCGAC GAGCCCGACG AGGCTCCGTC CGGCCAAGGC
TCCGTCGTCG AGGCGCGCCG TTCGTCCGAA TCCGACGAGG AGTCCGAGGA AGAGGACGAG
CATGTCGAAC AACTCGGCGG CGACGCCATG GAGGAGGTTC CGGTCCGGCC GCAGCGCTAT
CGCAGGCAAT ATAAGATCCA GGAAGTCATC AAGCGCCGTC AGGTGCTTCT GGTGCAGGTC
GTCAAGGAAG AGCGCGGCAA TAAGGGCGCG GCGCTGACCA CCTATCTCTC GCTCGCCGGC
CGCTATTCCG TGCTGATGCC CAACACTGCG CGCGGCGGCG GCATCTCCCG CAAAATCACC
GATTCGACGG ACCGGCAGCG GCTGAAATCC ATCGCCCAGG AGCTCGAAGT GCCGGAAGGC
ATGGGCGTCA TCCTGCGCAC GGCCGGCGCC AGCCGCACCA AGCCCGAGGT CAAGCGCGAC
TTTGAATATC TCCTGCGCAT GTGGGAGACC GTGCGCGAGA CGACGCTGAA ATCCTCGGCC
CCGACCCTCG TCTATGAGGA AGGTTCACTG ATCAAGCGCG CCATCCGCGA TCTCTTCAAT
AAGGACATCG ACGATATCGT CGTCGCCGGC GACAAGGGCT ATCGCGAGGC GCGCGATTTC
ATGCGCCTCT TGATGCCGAG CCATGTAAAT AGCGTTCAGC CCTATCGCGA CGCGCAGCCG
ATCTTCTCGA AATCGGACGT CGAGACGCAG CTCGACGCCA TGTTCCTCAA TCAGGTCACG
TTGAAGTCGG GCGGCTATAT CGTCATCAAC CAGACCGAGG CGCTGGTTGC AATCGACGTC
AATTCGGGGC GTTCGACCCG CGAGCACAAT ATCGAGGACA CCGCTCTTCG CACCAACCTC
GAGGCGGCCG ATGAGGTGGC GCGGCAGCTT CGCCTGCGCG ATCTCGCCGG GCTGATCGTC
GTCGATTTCA TCGACATGGA GGAAGGCCGC AACAACCGCG CCGTCGAGCG CCGGTTGAAG
GACGCGCTGA AAAACGATCG CGCGCGCATC CAGGTCGGCC GCATCTCGCA TTTCGGCCTG
CTCGAAATGT CGCGCCAGCG CATTCGCACC GGCGTGCTCG AAGGCTCGAC CGAACTCTGC
CCGCATTGTT CCGGCTCGGG CATCCTGCGC TCGACCGCCT CGATCGCGCT TCATGTGCTT
CGCGTCGCAG AGGACGCGCT GCTCAAAAGC GCCAGCCACG ATCTGATCAT CCGGACGCGG
TCGGCGGTCG CATTGTATAT TCTCAACGAA AAGCGCGCGC ATCTGCGCGA TCTCGAGCGC
CGCTTTGGCG TCGCCGTCAG CATCGAGGTG GACGACAGCC TGATCGGCTC CGTCTATCAC
GCCATGGAGC GCGGCGAGCC CGCCTCCGGC GGACATGAGC CGATCGAACT TGCGGCGCCC
GAGCCCGCGC AGATCGCGGC GCGCGACTTC GTTGAAGACG CGGCGCCCGG TTTTGCGCCG
GAGGATGAGG CGCCGGAAGG CGCTGCTGAG GATGGCGACG AGGATCAGGA GCCGGGCGAC
GCCAATGCCC GCGGAGAGGG CGAGAGCGAA GGCGACGCCG AGAACAGGCG GAAGCGCCGG
CGCCGGCGCC GGCGCGGACG CGGCGGCGAT CGTGAAGGCT CCGGCATTGC GGCCAATGCG
CCGCAGCCGT CGGACGATGC GCTTGGGGTC ATCGCCCAAT ATGGCGGCCT GCCGGGCGCC
ATACCCAGCG TCGACGTCAT AGCCGAGGCT TTCGAAAACG CCGACTATCA GCCCTCCGAA
GTGAATGCGG AGACGGCGCC CGAGTTGGCG GCGGACGAAT CCGGCGAGGT CGTCGAGACG
TCTTTTGAGC GCGAAGCGGC TCCCGCCAAG CCTGCGCGCC GGCCGCGCCG CGCCCGTTCG
CGCGAGGCCG CGCCGGAAGA GGCCGAGAGC GCCGAGCCTG TGACGGACCT TGCCTCGACA
GGCGCCGCTC CCAGCGGCGT CGAAGGCGAG GAAGACGACG CCGAGGCCGC GCAGCCGGCA
AGGCGCTCGC GGAGAACCCC GCGCCCCCGC GCGCCGCGCC GCGCCGCCTC CGAATTGCCC
GCCCCCGCGA GCGAGGCGGA AGCGGCGACG CTTGATCTTC AGGAAGCCGC CGCAGCGCCC
GCCCCCCTGT CCGAGCCAAC CTTGCCGTTC GAGTCGGCTC CGCCAGCCGC GACCGCCGTA
GAGCCGCCGG CGCCTTCCGC CTTCGAGCCG GCGACGGCCG CCTCAGAGAC GGAGGCTTCG
ACAGCCTCCT CCATCGTCGG CTCTGACGAG CCGGCGCCGG GGACCGAGTC CAACCCGCCG
GAGTCGGATC GGCCGAAGCG ATCCGGCTGG TGGCAGCGCG CCAAAGCCAC GCTTGGCCGA
TAA
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| Protein sequence | MANKMLIDAS HPEETRVVVL RGNRVEEFDF ESASKKQLRG NIYLAKVTRV EPSLQAAFVD
YGGNRHGFLA FSEIHPDYYQ IPVVDRQALI EEEARAQQRE ADDEESSPRR SRRHRRGDRN
GGDRSGNGDR NGKRAEKRSG DAETLSEPYE ASSEETQQFD AAQDDAGSPN RNEARGEEHA
GERFEAEAQD RRAEEAPGDD FMSFEAVSDD VERDFEDAPP AAAFTAAPDA VRSTEEAFSP
AGEDAQQDAD QAASVAADSH ESGAYEEQPA PLFETGAAAP YAEAASVSLD EPDEAPSGQG
SVVEARRSSE SDEESEEEDE HVEQLGGDAM EEVPVRPQRY RRQYKIQEVI KRRQVLLVQV
VKEERGNKGA ALTTYLSLAG RYSVLMPNTA RGGGISRKIT DSTDRQRLKS IAQELEVPEG
MGVILRTAGA SRTKPEVKRD FEYLLRMWET VRETTLKSSA PTLVYEEGSL IKRAIRDLFN
KDIDDIVVAG DKGYREARDF MRLLMPSHVN SVQPYRDAQP IFSKSDVETQ LDAMFLNQVT
LKSGGYIVIN QTEALVAIDV NSGRSTREHN IEDTALRTNL EAADEVARQL RLRDLAGLIV
VDFIDMEEGR NNRAVERRLK DALKNDRARI QVGRISHFGL LEMSRQRIRT GVLEGSTELC
PHCSGSGILR STASIALHVL RVAEDALLKS ASHDLIIRTR SAVALYILNE KRAHLRDLER
RFGVAVSIEV DDSLIGSVYH AMERGEPASG GHEPIELAAP EPAQIAARDF VEDAAPGFAP
EDEAPEGAAE DGDEDQEPGD ANARGEGESE GDAENRRKRR RRRRRGRGGD REGSGIAANA
PQPSDDALGV IAQYGGLPGA IPSVDVIAEA FENADYQPSE VNAETAPELA ADESGEVVET
SFEREAAPAK PARRPRRARS REAAPEEAES AEPVTDLAST GAAPSGVEGE EDDAEAAQPA
RRSRRTPRPR APRRAASELP APASEAEAAT LDLQEAAAAP APLSEPTLPF ESAPPAATAV
EPPAPSAFEP ATAASETEAS TASSIVGSDE PAPGTESNPP ESDRPKRSGW WQRAKATLGR
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