Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_0643 |
Symbol | |
ID | 7093724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 697048 |
End bp | 698391 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643463978 |
Product | carboxyl-terminal protease |
Protein accession | YP_002360977 |
Protein GI | 217976830 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.0139485 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGGA AGGTATCACT TGTCATGCTC GGCGCCGTTC TCGGCGCGTC AGTCGTGACC GTCGGCACGC AGACGAGAGT GTTCTCGGAC GGCGTCGCAA GCGCGGCTGC GTCCGATACT TATCGCAATC TCAATCTGTT CGGCGACGTT TTCGAGAAAA TCCGCTCCGA CTATGTTGAA AAGCCCGACG AGCAGAAGCT GGTCGAATCG GCGATCAACG GGATGCTCAC CTCGCTCGAT CCGCATTCGA GCTATATGGA CGCCAAAAGC TTCCGCGACA TGCAGGTGCA GACGCGCGGC GAATTCGGCG GCCTCGGCAT TGAGGTGACT CAGGAGGACG GCCTCATCAA GGTGGTGACG CCGATCGACG ACACGCCGGC CTCGCGCGGC GGCATTCTCT CGGGCGACAT CATCACCGCC ATCGACGGCG AAAACGTACA GGGCCTGACC CTGAACCAGG CCGTCGACAA GATGCGCGGC GCGCCCAACA CGCCGGTGAC GCTGAAAGTC CTGCGCGGGC CGAACAAGGA CGCCCAGGAC ATCAAGCTGA CCCGCGCGGT GATCCAGATC AAGTCGGTTC GCTCGCATCA GGAAGGCGAC GACATCGGCT ATATCCGCAT CACCCAGTTC AATGAGCAGA CGGGCGAGGG CGTCGCAGCC GCCATCAAGA AGTTCCAGAG CGAGATCCCG GCCGATAAAT TCAAGGGCTA CATCCTCGAC CTCCGCAACA ATCCCGGCGG CTTGCTCGAT CAGTCGATCG CTGTCTCGAA CGCGTTCCTT GACCGCGGCG AGATCGTCTC GACCCGAGGC CGCAACGCCG ATGAATCCAT GCGCTACAAT GCGCACCCGG GCGATCTTTC CAAAGGCAAG CCCCTGGTCG TGCTGATCAA TGGCGGTTCG GCCTCGGCGT CCGAGATCGT CGCCGGCGCG CTGCAGGATC ACAAGCGCGG CACCATTCTC GGCACGCGCT CCTTCGGCAA GGGGTCGGTG CAGACCATCA TTCCGCTCGG CCAGAACAAT GGCGCGGTGC GTTTGACGAC GGCGCGTTAT TATACGCCGT CGGGACGCTC GATTCAGGCC AAAGGCATCG ATCCTGATAC GATCGTGCTG CAGGACGTGC CCGATGAGCT GAAGGGCAAG GACGACACCA AGGGCGAAGC CTCGCTCAAG GGCCATCTCA AGAACGGCGA TGACGAGAAG GGCGGGTCGC AAGCCTATGT GCCGCCGAAT CCGAAAGACG ACAAGCAGTT GATCGCCGCC GAAGACATGC TGCGCGGCGT GACGAAAACC TCGAGCAAGA CCCCGACTCA GCCCGCCACC GAGCCGGAAA AGGTTCCGAA CTAG
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Protein sequence | MMRKVSLVML GAVLGASVVT VGTQTRVFSD GVASAAASDT YRNLNLFGDV FEKIRSDYVE KPDEQKLVES AINGMLTSLD PHSSYMDAKS FRDMQVQTRG EFGGLGIEVT QEDGLIKVVT PIDDTPASRG GILSGDIITA IDGENVQGLT LNQAVDKMRG APNTPVTLKV LRGPNKDAQD IKLTRAVIQI KSVRSHQEGD DIGYIRITQF NEQTGEGVAA AIKKFQSEIP ADKFKGYILD LRNNPGGLLD QSIAVSNAFL DRGEIVSTRG RNADESMRYN AHPGDLSKGK PLVVLINGGS ASASEIVAGA LQDHKRGTIL GTRSFGKGSV QTIIPLGQNN GAVRLTTARY YTPSGRSIQA KGIDPDTIVL QDVPDELKGK DDTKGEASLK GHLKNGDDEK GGSQAYVPPN PKDDKQLIAA EDMLRGVTKT SSKTPTQPAT EPEKVPN
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