| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0630 |
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| Symbol | |
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| ID | 7093710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 683661 |
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| End bp | 685370 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643463964 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002360964 |
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| Protein GI | 217976817 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.00465168 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGAAGCCTT TCTATCGTCT GCCTGGCTCG CCGGGGGGGA TCGCCGACGC CTTACCGACC
CGCTTGTGGC TGCGGCGCGA GCCACGGGCG CCGGACGCCG GGCCGGCGTC GCGCATCGCC
GCGCTCGCGC TGGCGGGTCT CCTCGCCGGT TGCGCCGTCG GGCCGGACTT CGTTCCGCCT
GGGGCGCCCG TCGCCCCGAA ATATCTCGAA TCGCGCAACA AGGCCGTCGA CAGTTCGCGC
CAGGACTATC GCGACTGGTG GAGGGCGTTT CATGATCCGG CGCTCGATCG GCTGATCGAG
ATCGCCTACC AGCAAAATCT GACGCTTCTC AGCGCCGGGA CGCGCGTGCT GCAGGCCAGA
GCGCAGCTTG GCGTCGCCAT TGGCGAACTC TATCCGCAAC AGCAGCAAGG CCTCGGGCTG
ACGACCTATA ATCGGCCGAG CCACGCCGAC GCCGCCGCCA ACCCGCAGTT GCAGCTGAAC
AATTTCTGGC AGTCGCAGCT CGGCGTCAGA GCCGCCTGGG AGCTCGACTT CTGGGGCAAA
TTCCGGCGGG GAGTCGAATC GGCAGACGCC GCGTATCTTG CCTCGATCGC CAGCTATGAC
GAAGTGCTCG TCACCCTGCT TGGCGACGTC GCCAGGACCT ACATCGGCGT GCGCACCCTG
GAGAAGCGCA TCGCCATCGC CAGAGCCAAT ATCGTTCGGC AGAAGGAGGC GGTGCAGGTC
GCGCGCGACC GCTTCGCCGG CGGCGCTTCG ACCAAGCTCG ACGTCTATCA GGCCGAAAAT
GTGCTGGGCC AGACGGAAGC CTCGGTCCCG CAGCTGACGC AGCAGTTGCA GCAGGGCCTC
AACGCCCTGC GCGTGCTGCT TGGCCTGACG CCGGAACCGA TCGAATCCCT GCTGCGCGGA
TCGACCGGCA AAATCCCGGT CGCTCCGCCG AAGATTTTTG TCGGCATTCC GGCCGATCTG
TTGCGGCGGC GCCCCGACGT GCGCGCGGCC GAATTGCAGG CGGCGGCGCA AAGCGCTCAG
ATCGGCGTCG CGCAGGCGGA GCTCTATCCG GCCTTGACTC TGACGGGGCG GATCGGCGGC
TCGGCAAGCA CCATCAACGG CGCCAAGCTG AGCTCGATCT TTACGCCGGC GGGGCTCGCC
TATTCCTTCG GCCCGTCGTT CCAGTGGAAC ATCCTGAATT ACGGCCAGAT CACCAACAAT
GTGCGTCTCC AGGACGCCAC CTTGCAGCAA TATCTCGTCG ACTATCAAAA TACGGTGCTG
AAGGCGCAGC AGGACGTCGA GAACGGGATT TCCGGCTATC TGCAATCGCG GCTGGCGACG
GCGGCGCTCC GGCGCAGCGT CGCGGCGGCC AATGGCGCGC TCGGCATTTC GCTGCTCGAA
TATCAACAGG GCACGCGCGA TTTCACCTCC GTCTTGACCT CGGAGCAGAA TCTGCTCCAG
GCGCAGAACG ATCTCGCCAT CGCCGAGGGC GACATTCCGC TCGCCGTGAC CGCCGTGTAC
GCGGCGCTGG GCGGCGGCTG GCAGATCCGC GAGGGCAATG ATTTCGTGCC GCCGGCCACA
AACGCCGAGA TGCGCGCGCG CACGGATTGG GGCGATGTGC TGCCGCCGGC GGGAGCTCCC
AAACCGCCGC CGCCCGCGCT GGCTGCGCCG ACGCCCGGGC TGCCGGGCCC GGAAGATGCC
GGACCAACCG TGCGGGCGCC GGAATTTTGA
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| Protein sequence | MKPFYRLPGS PGGIADALPT RLWLRREPRA PDAGPASRIA ALALAGLLAG CAVGPDFVPP
GAPVAPKYLE SRNKAVDSSR QDYRDWWRAF HDPALDRLIE IAYQQNLTLL SAGTRVLQAR
AQLGVAIGEL YPQQQQGLGL TTYNRPSHAD AAANPQLQLN NFWQSQLGVR AAWELDFWGK
FRRGVESADA AYLASIASYD EVLVTLLGDV ARTYIGVRTL EKRIAIARAN IVRQKEAVQV
ARDRFAGGAS TKLDVYQAEN VLGQTEASVP QLTQQLQQGL NALRVLLGLT PEPIESLLRG
STGKIPVAPP KIFVGIPADL LRRRPDVRAA ELQAAAQSAQ IGVAQAELYP ALTLTGRIGG
SASTINGAKL SSIFTPAGLA YSFGPSFQWN ILNYGQITNN VRLQDATLQQ YLVDYQNTVL
KAQQDVENGI SGYLQSRLAT AALRRSVAAA NGALGISLLE YQQGTRDFTS VLTSEQNLLQ
AQNDLAIAEG DIPLAVTAVY AALGGGWQIR EGNDFVPPAT NAEMRARTDW GDVLPPAGAP
KPPPPALAAP TPGLPGPEDA GPTVRAPEF
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