| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0629 |
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| Symbol | |
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| ID | 7093709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 682390 |
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| End bp | 683634 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643463963 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002360963 |
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| Protein GI | 217976816 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.00302597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGCCGA GGTCCATGGA AACAAGGCGC GCAGGGGTGG CGGTCGGCGC TCAATGGCGG
GGCGCCCCTT GGCGTGGACT GGCGCTGGCC CTGCTCGCCG CCGCTCTCTT GCCGCTCGAG
GCCCGCGCCG GGATCGGGAC CGACGCCGCA GAAAAAGCCA AAGCGCCGAA TCCGGGCGCG
GTTTTCGCGG CGGCTCCGCC GGAAATCCCT GTGGTGCGGC CGAAATCGCA AACCGTCACG
GATTATGTCG AGGTCACGGG CACCGTCGCT TCCGCCAATG TGGTCAAGCT GATCGCCCGC
GTCGAAGGCT ATCTTGAAAA GATCCACTTT GAAGACGGCG CCCTCGTGAA GAAGGACGAT
CTTCTGTTCA CCATACAGCA GGCCCAATAC AAGGCTCAGT TGCAGCAAGC CGAAGCGCAA
TTGCAGGCGC AACAGGCGGC GCTCGTCTAC GCCAAGACCG AGGTCGTGCG CTACACCGCG
CTTTACAAAA AGAACGCGGC GACGGCGACC GAAGTCGACA AATGGGTCTA TCAGCGCGCC
GCCGCCGAGG CGGGAATTCT CGGCGCGCAG GGACAGATCG AGGTCGCCAA GCTGAATTTG
GCCTATACCG AAATCCGGGC GCCGTTCGAT GGCCTGATGG GTAAGCATCT GGTCGATCCG
GGCAATGTGG TCGGCGGGGC AGGGCAGCAG ACCGCGCTCG CCGAGATCAA CCAGCTCGAT
CCGATCTATG TGACGGCGAC CTTGAGCGAG GCTCAGGTGC TCGACATTCG CGCCAATCTC
AACGAGAAGC GCCTGTCGCC CGCCGACATC TTGAAGGTCC CCGTCGATGT CGGCCTCGAG
AATGGCAAAG GCTTTCCCTA CAGCGGCTAT CTGGAATTCG TATCGCCGCA GTTTGATCCG
TCGACTGGCA CGCTGCAGGT GCGCGGCATT TTTAAAAATC CCGATCGCAA TTTACTGCCC
GGCCTTTTCG TGCGCATGCG TCTGCCAAAA GGCCATGTGG CGCAAGGGGC GCTCCTCGTG
CCGGCGCGCG CCATCGGCGA GGATCAGGGC GGCCTTTATC TGATGGTCGT CAACAAGGAC
AATGTCGTCG AACAGCGCTA CGTCAAACCG GCGGAGCAGG TCGGAAATCT CAGGGTGATC
AGCTCCGGGA TTTCCGCCGA CGACCGCGTT GTCGTCGGCG ATCTCTGGCG CGTGTCCCCC
GGCCTCAAGG TCGTCCCGAA GCTGACCAGC ATCGACGCCC AGTAG
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| Protein sequence | MKPRSMETRR AGVAVGAQWR GAPWRGLALA LLAAALLPLE ARAGIGTDAA EKAKAPNPGA
VFAAAPPEIP VVRPKSQTVT DYVEVTGTVA SANVVKLIAR VEGYLEKIHF EDGALVKKDD
LLFTIQQAQY KAQLQQAEAQ LQAQQAALVY AKTEVVRYTA LYKKNAATAT EVDKWVYQRA
AAEAGILGAQ GQIEVAKLNL AYTEIRAPFD GLMGKHLVDP GNVVGGAGQQ TALAEINQLD
PIYVTATLSE AQVLDIRANL NEKRLSPADI LKVPVDVGLE NGKGFPYSGY LEFVSPQFDP
STGTLQVRGI FKNPDRNLLP GLFVRMRLPK GHVAQGALLV PARAIGEDQG GLYLMVVNKD
NVVEQRYVKP AEQVGNLRVI SSGISADDRV VVGDLWRVSP GLKVVPKLTS IDAQ
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