| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0623 |
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| Symbol | |
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| ID | 7093703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 673948 |
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| End bp | 675162 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643463957 |
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| Product | polyhydroxyalkanoate depolymerase, intracellular |
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| Protein accession | YP_002360957 |
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| Protein GI | 217976810 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.00770897 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTATGAAG CCTATGGCGC ACAGGCCAAT GTGCTCGATT TTTGCCGTCC TCTCGCTTCG
GCGACGGTGG CGGCCCTGCG GCAACCCTGG CCCATGTTTG GCGAGATGTT GTCCACGCGT
AAATTCGCGG GAATGCTCGA AACCTTCGCA AATCTCGCCA TCACGCATGA GCGTCTGCCT
TTCGATATTA CGGAAGTCGC GGACGGCAAC GAGATTGTCC CGGTGACCGA GGAAGTCGTC
GCTTCGACGC CTTTCGCGAC GCTTCTGCGA TTCAAGAAGG AGACGAGCGC GCAGCAGCAG
CGCGTGCTGA TCGTCGCGCC GATGTCCGGC CATTTTGCGA CCCTGCTCAA GGCCACGGTG
AAGACGATGC TGCAGCATCA CGACGTCTAC ATCACCGACT GGCGCAATAT AAGGGATATC
CCGATCGCCG AGGGCGAGTT CAGCTTCGAC ACTTACGTCG ATCACGTGAT CGATTTTCTA
CGCGTGATGG GGCCGAGGTC GCATGTCGTC GCCGTCTGCC AGCCTTGCGT CGCCGTGCTC
GCCGCAGCCT CGATCATGGC TGAGCAGGAT GACCCCGCGC AGCCGGCGAG CATGACGCTG
ATGGCCGGGC CAATCGACAC CCGGATCAAC CCGACCAAGG TCAATGAGCT CGCGAAGACG
AAGCCGATCG AATGGTTCGA GCGCAATCTC CTCGCTAACG TGCCGAAAAA ATTCGGCGGC
GCGGGGCGGA AGGTCTATCC GGGCTTCATG CAGCTCACCG CTTTCGTGAG CATGAATCCC
GAACGCCATA TGCAGTCATT CAAGGATATG GCGAAAGCCT ATACCGAAAA CGACATGCCG
AAGTTCAAAT TCATCAAGGA TTTTTACGCC GAATATTTCG CCATCATGGA TCTGCCGGCG
GAATTTTATA TTCCAACCGT CAAGACCGTC TTTCAGGATC ATTTGCTTCC GCTCGGCAAG
CTGGAGGTGC ATGGACGGAC GATCAAGCCG AAGGCGATCC GCAAGACGGC GCTGCTCACC
ATAGAGGGCG AGCGCGACGA TATTTGCGGG CTCGGCCAGA CGCTGGCGGC GCAAGATCTC
TGCTCCGGCC TCAGGCAGTA TAAGAAATCG CACCATGTCC AGACCGGCGT CGGCCACTAC
GGCACTTTTA GCGGCCGGCG CTGGAACAAT GAGATCTATC CGAAACTTCG CGACGTGATC
GAAATGACCG CCTGA
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| Protein sequence | MYEAYGAQAN VLDFCRPLAS ATVAALRQPW PMFGEMLSTR KFAGMLETFA NLAITHERLP
FDITEVADGN EIVPVTEEVV ASTPFATLLR FKKETSAQQQ RVLIVAPMSG HFATLLKATV
KTMLQHHDVY ITDWRNIRDI PIAEGEFSFD TYVDHVIDFL RVMGPRSHVV AVCQPCVAVL
AAASIMAEQD DPAQPASMTL MAGPIDTRIN PTKVNELAKT KPIEWFERNL LANVPKKFGG
AGRKVYPGFM QLTAFVSMNP ERHMQSFKDM AKAYTENDMP KFKFIKDFYA EYFAIMDLPA
EFYIPTVKTV FQDHLLPLGK LEVHGRTIKP KAIRKTALLT IEGERDDICG LGQTLAAQDL
CSGLRQYKKS HHVQTGVGHY GTFSGRRWNN EIYPKLRDVI EMTA
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