Gene Msil_0544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0544 
Symbol 
ID7091605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp604134 
End bp605357 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content63% 
IMG OID643463874 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_002360878 
Protein GI217976731 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGTTC CAAATCCGCC GCTTCACATC CTCAGGCTCA TGGGCCTCGC CATCCTTGCC 
GGGGTTTGTT TTGGCTCGGG TCCAGCCTCG GCGCAAGCGA TCCAGACAAG CGTCCCGCAC
GCCATATTGA TCGATGTCGA GACCGGCAGC GTGCTGTTCG AGAAGGACGC CGACGCCCCG
GTGACGCCCG CCTCGACGGT CAAGGTCATG ACCGCAGACG TCGTTTTTGG CGAACTCGCC
CAGGGCCGCA TCAAGCTCGA CGACGAATTT ACGATCAGCG AGCACGCCTG GCGGACGGGC
GGGGCGCCCG CGCGCGCTTC CAGCATGTTC GCCGCGCTCA ACAGCCGCGT GCGCGTCGAG
GATCTGATCC GCGGCCTTGT GATCGATTCC GGCAATGACG CCGCCATCGC GCTCGCCGAA
GGAGTCGCCG GGTCCGAGAC CGCCTTCGCC GGCTTGATGA TGAAGCGCGG CCACGAGCTC
GGGCTGACCC GATCGGTTTT CACCAATCCC TGGGGCAAGG ACGATCCGGA GCAGAAGGTC
ACGCCGCGCG AGATGACAAT TCTCGCCGCG CATGTGATCG CGACCTATCC AGATTATTAT
AAATATTTCG GCGAGAAGGA GTTCACCTGG AACAAGATCC GCCAGACCAA CCGCAATCCG
CTGCTGACGA TGGATATCGG CGCCGACGGC CTCAAGACCG GCAATATCGA CGCCAGCGGC
TTTGGTCTCG TCGGTTCGGC CGTGCAGAAC GGCCAGCGGT TGATCCTGGC GCTTTATGGC
GCGACGACCG CGAAGGAGCG CGCCGAGGAA GCGCGCAAAC TGTTTCTCTG GGCGTTCCGG
TCCTTCAGCT CCAAGTCGCT GTTCAGCGCC GATGAGACGA TCGGCTACGC CAAGGTTTAC
GGCGGAGCTA GCTTCGAGGC GCCGCTTGTC GCTGGGCGAG AGGTCAAGGC GCTCGTGCCG
CGCGTCGGCG GCGAGAAATT TACCGGGCGC ATCGTTTATA ATGGCCCGCT GATCGCGCCG
GTCGAGGCCG GGAAGGAAGT GGCGCGGCTG AAAATCTTTC GCGGCGCGGT CGAGGTGCTC
GATCTGCCGC TGAAGACGCA AGAGGCGGTT GAGGTTGGCT CGCTGCCGCG CCGGGCCATG
GGAGCAGGGC TTGAATATGT CGGGGGCTTG TTCCGCAAAT ATGTGGGCAG CAAGATCGAC
AGCAAATATG TCGCAAACCA ATGA
 
Protein sequence
MIVPNPPLHI LRLMGLAILA GVCFGSGPAS AQAIQTSVPH AILIDVETGS VLFEKDADAP 
VTPASTVKVM TADVVFGELA QGRIKLDDEF TISEHAWRTG GAPARASSMF AALNSRVRVE
DLIRGLVIDS GNDAAIALAE GVAGSETAFA GLMMKRGHEL GLTRSVFTNP WGKDDPEQKV
TPREMTILAA HVIATYPDYY KYFGEKEFTW NKIRQTNRNP LLTMDIGADG LKTGNIDASG
FGLVGSAVQN GQRLILALYG ATTAKERAEE ARKLFLWAFR SFSSKSLFSA DETIGYAKVY
GGASFEAPLV AGREVKALVP RVGGEKFTGR IVYNGPLIAP VEAGKEVARL KIFRGAVEVL
DLPLKTQEAV EVGSLPRRAM GAGLEYVGGL FRKYVGSKID SKYVANQ