Gene Msil_0538 details

Gene Information

• Locus tag: Msil_0538
• ID: 7091599
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylocella silvestris BL2
• Kingdom: Bacteria
• Replicon accession: NC_011666
• Strand: -
• Start bp: 598069
• End bp: 598722
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643463868
• Product: cold-shock DNA-binding domain protein
• Protein accession: YP_002360872
• Protein GI: 217976725
• COG category: [K] Transcription
• COG ID: [COG1278] Cold shock proteins

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 53
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCAAAG GCAGAGACTT CCGGGGACCG AAGAAGCGCG GTTTCGACGA TGATGGGCCG 
TCCCCCTACG ACCCGCCGCG GCAGAGCCGG TCGCCCCGCG GCGGCGGCTT CGGCGGTGCG 
CCTGAGATGC CGATGCCAAC TTCAGGGCCC AGCATTGACG CGGTCGTGAA ATGGTTCAAG 
GGCGACAAGG GCTTCGGCTT CGTCGAACTC GGAAATGGTA CAGGCGACGC GTTCCTGCAT 
ATCGGCGCGC TTCAGGCAGC CGGATATGAG ACGGTGCCGC CGGGCGCAAA GCTCAAGGTC 
AATGTCAGCA ATGGCATGAA GGGCGCTCAG GTTACGCGGG TGCTCGAAGT CGACACCGCA 
GGCGCTGCCG AACGTGCGCC GCAGCAGCCG CGCTTTAGCA GCGATTCGCC GCGCCCTGCC 
CGCCGCGCCC CCGATCCGTC GACGGCGATC TCGGTCACCG GCACGGTCAA GTGGTTCGAC 
GACAATAAGG GCTTCGGCTT CGTCCAGTCG AATGATGGCG GCAAGGACGT GTTCGTCCAT 
ATCTCCATTC TTGGGCCGTC GGGCGTGCAG AATCTGGCGG AAGGCCAGGC GGTCAGCATG 
CGGGTCGTCG ATACGCCGAA AGGCCGCGAA GCTCTGTCGA TTTCGCTCGA GTAG 

 

Protein sequence

MSKGRDFRGP KKRGFDDDGP SPYDPPRQSR SPRGGGFGGA PEMPMPTSGP SIDAVVKWFK 
GDKGFGFVEL GNGTGDAFLH IGALQAAGYE TVPPGAKLKV NVSNGMKGAQ VTRVLEVDTA 
GAAERAPQQP RFSSDSPRPA RRAPDPSTAI SVTGTVKWFD DNKGFGFVQS NDGGKDVFVH 
ISILGPSGVQ NLAEGQAVSM RVVDTPKGRE ALSISLE