Gene Msil_0498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0498 
Symbol 
ID7091231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp554579 
End bp555343 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content67% 
IMG OID643463828 
Productchromosome segregation and condensation protein, ScpB 
Protein accessionYP_002360832 
Protein GI217976685 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.338231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGAA GGGATCTACA CACGCAGATG GGAGACATCG CCAGACTCTT CCAGACCGAG 
GCCGAGCCCG GCCCATCCGC GGCGGCCAAT GCGCAGCTTG TCGAAGCGAT GCGGATCGCC
GAGGCGATGA TTTTCGCAAG CCCGGAGCCG CTGGCCGAGC AGGAGATCGA AAGGCGGCTG
CCGCGCGGCG TCGCGATCGC CTCCGTTCTC GATCATCTGA AAGCGAGCTA CAGCGCGCGC
GGCGTCAATC TCGTGCGCGT CGGCGGCAAA TGGATGTTCC GCACGGCGAC CGATCTTGCC
TGGCTGCTCG CCGGCGGCGA GGGCGAGCAG AAGAAAATGT CGCGCGCCGC GCTGGAGACG
CTGGCGATCA TCGCCTACCA CCAGCCGGTG ACGCGCGCCG AGATCGAAGA CATTCGCGGC
GTCGCCATCT CCAAGGGGAC GCTCGACGTC TTGCTCGAAA CAGGCTGGGT CCGGCTGCGC
GGGCGCCGGC GCGCGCCGGG ACGCCCGCTG ACCTATGGCA CGACGCAGGA ATTTTTGATC
CATTTCGGGT TAGAGGCCGT TGGCGACCTG CCTGGCCTTG AAGAATTGAA GGGCGCCGGA
TTGTTCGACG GGCGGCTGCC GTCGAGCTTT TCCATCCCGC AGCCGAGCGA CGACGACGCG
CTGGCCGCCG ATGAGGATCC GCTGGAGGAT GATGCGGAGC CGGTGGAGGA GGAGGAAGCC
GCCGAGCGGG ATCCGGCTGG ATCGCAACAG CCCACCGACG ACTGA
 
Protein sequence
MTGRDLHTQM GDIARLFQTE AEPGPSAAAN AQLVEAMRIA EAMIFASPEP LAEQEIERRL 
PRGVAIASVL DHLKASYSAR GVNLVRVGGK WMFRTATDLA WLLAGGEGEQ KKMSRAALET
LAIIAYHQPV TRAEIEDIRG VAISKGTLDV LLETGWVRLR GRRRAPGRPL TYGTTQEFLI
HFGLEAVGDL PGLEELKGAG LFDGRLPSSF SIPQPSDDDA LAADEDPLED DAEPVEEEEA
AERDPAGSQQ PTDD