Gene Msil_0484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0484 
Symbol 
ID7091216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp533850 
End bp535271 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content57% 
IMG OID643463814 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_002360819 
Protein GI217976672 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGATT CTCCATCGCC ACCCCTTTCC GCGCCAGACC GATGGATGCT CTCGCTTCGC 
ACACAGCTGA TCCTCGGCTT CGTCCTCATC GACATTCTGG CCGGAATAGT TTGCGCCGGC
GTTATCATCG TAAAGGCCCG TCACGCGGCG CTGATCGAGA TGAAAGTGTC GGTGCGGTTG
GCGGAAATAC TTGTCGCCGA ATCGGTTCGG CTGACCGAAC CGCATACGCC GCCCGATCGC
CTTCTCAACA CGCTGGCGCA GCAGCTCGGG TTTATCCGCC ACGTCCGATT TGCGGTGTTC
GATGCGAACC AACAGGAAAT CCTCGTCGAC CGCACGCTGA CGACGGATCA GCTACGGGAG
CGCGAGCCTG CTCCTGGCTG GTTCGTGTCC TTGATTGCTC CCCCCGCGGA GCGGCATCAG
ATGCCGATCA TCGCGCAGCA TCGCAAGATT GGAACAGTCT TCATTATCGA GGCTCCACAG
GATGAAGTGG CGGAAGTGTG GGAGGATATG TCGGCCTTGA CTGCGATCGC TTTTGTCGCC
AATCTGGCGA TACTTGGCAT GTTGTATCTG ACTTTCGGCC GCATACTCGT GCCGCTAACC
AGGCTGGCGC ATGGGCTGTC CGAGCTCGAA CACCAGAACT TTGCAACTCG CGTCGCCGAA
CCGCGCATCC GCGAACTCGC TGAGATCGTC CGCCGGTTCA ACCATCTCGC CACGGCGCTT
GGCGAGACGC ATGACGAAAA TCGAAGGCTC AATCAGCGGT TGATCAATCT GCAGGACGAG
GAACGCCGCC GCATCGCGCT CGATCTGCAC GATGAATTCG GGCCTTGCTT CTTCGGGCTG
AGCGCCAGTC TCCGCCTGCT CAAAGCCATT GCCGCATCAT TAACCCATGA AGATCACTCC
AGTGCGATTG AAACGCTGAC CGAGCAGACG GCCCTGATGG CGGAAATTAT CGAACGCATG
CGAGTCGCCA ATCGTGGTAT TCTCACCAGC TTGCGACCGA TGGCGCTCGG CCATGTTCCC
TTGCAGAAGG TATTGGAAAT TCTCATTGCC GATCTTTCAA AACTTCACGC GGGCGTTTCC
ATTTCTCTAA AGGCGGAAGG GCTGCGATAC ACCTACAGCG AGCCGATCGA TTTGACGGTC
TACCGATGTG TTCAGGAAAG CGTAACGAAC GCCATTCGCC ATTCGACGGC GTCGACGATT
ACGATTGAAC TTCATGAGAT GGAGGACATG CAGGAAAATG CAAAATGCAA GACATGTTTG
CGCTTGGTTG TTGAGGATTC AGGCAAAGGA ATTATGGACG ACATTCAAGC CGGCTTTGGT
CTTGCGGGGA TGAAGGAGCG CGTCAACGCT CTTGGCGGCG TCTGGTCGAT CGCCAATCGG
GATGGATATG GCGCGCGCGT TTGCATGATT CTCCCCATCT GA
 
Protein sequence
MTDSPSPPLS APDRWMLSLR TQLILGFVLI DILAGIVCAG VIIVKARHAA LIEMKVSVRL 
AEILVAESVR LTEPHTPPDR LLNTLAQQLG FIRHVRFAVF DANQQEILVD RTLTTDQLRE
REPAPGWFVS LIAPPAERHQ MPIIAQHRKI GTVFIIEAPQ DEVAEVWEDM SALTAIAFVA
NLAILGMLYL TFGRILVPLT RLAHGLSELE HQNFATRVAE PRIRELAEIV RRFNHLATAL
GETHDENRRL NQRLINLQDE ERRRIALDLH DEFGPCFFGL SASLRLLKAI AASLTHEDHS
SAIETLTEQT ALMAEIIERM RVANRGILTS LRPMALGHVP LQKVLEILIA DLSKLHAGVS
ISLKAEGLRY TYSEPIDLTV YRCVQESVTN AIRHSTASTI TIELHEMEDM QENAKCKTCL
RLVVEDSGKG IMDDIQAGFG LAGMKERVNA LGGVWSIANR DGYGARVCMI LPI