Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_0408 |
Symbol | |
ID | 7093567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 447294 |
End bp | 449435 |
Gene Length | 2142 bp |
Protein Length | 713 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643463738 |
Product | glycoside hydrolase family 3 domain protein |
Protein accession | YP_002360744 |
Protein GI | 217976597 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGCTCG ATCTCAAGAC ACTTCTCGCC GACATGACGC TGGAGGAAAA AATCGGCCAG CTCACCATGA CCGCCGGAAG CTATGCGGTC ACCGGGCCGA TCGTTGGCGG CGACGTTGAG GCCGCAATTC GCGCCGGGCG CATCGGCAGC CTGCTCAATC TTTGGGGCGC AACGGAAATC GCCGCTATTC AAAAGATTGC GATGGAGGAG TCGCGTCTCG GCATTCCGCT GATCGTCGGC TTCGACGTTC TGCACGGCCA TCGCATGATC TTTCCCCTTC CGCTCGCGGA AGCCTGCGCC TTCGATCCAG CGCTCTGGCG CGCGACCGCG CGGGCCGCGG CGCGGGAGGC GGCCGCCGAT GGCGTCTCCA TGGTCTTTGC GCCGATGCTC GACGTCGCGC GCGATCCGCG CTGGGGCCGG ATTGCCGAGG GCGCCGGCGA AGACCCCTTC GTCACATGCG AATTCGCCAA GGCCAAGATC GCCGGTTTTC AAGGCGAGGA TCTCGCGGCT CCGGCGGCCG TCGCCGCCGT CGCCAAGCAT TTTTGCGCCT ATGGCGCCGC AGAGGGAGGC CGCGACTACG CCTCCGCGGA TGTGTCCGAG CGCGCTTTGC ACGAAGTCTA CCTGCCGCCT TTCGCCGCGG CGATTGAGGC CGGCTGCGCA GCCATCATGC CGGCCTTCAT GGATCTCGCC GGCGTCCCCA TGACCGCGCA TCAACCGCTT CTGCGCGGCT GGCTGCGCGA GGCGCGGGGC TTTGAAGGCG TCATCGTCAG CGATTACAAC GCGTTGGCGG AACTGATGCG CCATGGCGTC GCCGCCAATC TGATTGAGGC GGCCGCGCTG GCGCTGCGGG CGGGCGTCGA CATCGACATG ATGAGTTCGG CTTACGCCGA CGGCCTGCCG CAGGCTTTGG CGCGGGGCCT TGTCACGGAG GAGGACATCG ACGCCTGCGT GCATCGGGTG CTGGAGCTAA AGCAAAAACT TGGGCTGTTC GACGGCGTTC TTCGGGGCGC AAGGCGCCAA GGCCGCGACA GCGCGGAGCC GGCGCTTGCG CGAGACGCCG CGCGGCGTTC GATCGTTCTT TTGACCAATC ATGGCGCGCT GCCGCTTTCC CCTTCTTTGC GAAAAATCGC CTTGATCGGC CCCCTGTCGG AGGCCGCGGG CGAAATGGAT GGCTCATGGG CCGCCGCCGG CGACAGAAAC GCCGCCGTTT CCATTCTGGA CGGGCTGACG GCCGCGCTTC CTACAACCGA GATGTTTTGT GCGGCGGGCG TCGCCGTCGA TTATGGGAAC GCGGCCGGCA TTGCTGACGC GATGGCGCTC TGCGAGGAGG CGGAGCTGAT CATTCTCTGT CTTGGCGAAA GCGCCGAAAT GAGCGGGGAG GCGGCCTCGC GCGCCGATCT CGGCCTGCCC GGGCGACAAA GAGAGCTTGC CGAAGCCGCG CTCGGTCTGG GGCAGAAACT TGGGCGCCCC GTCGTCGCCC TGCTCTCGAG CGGACGTCCG CTCACGCTGC CCTGGCTTTT CGAGCGCGCC GACGCTGTGG CGGCGACCTG GTTCCTGGGC GCTGAAGCCG GCCATGCGAT TGCCGATGTT TTGACTGGCC AGTTCAATCC GGTCGGACGT CTCGCGCTAA GCTGGCCCCG CGCGGTCGGA CAGATCCCGC TGTTTTATGC GGCCCGGCCG ACGGGCCGGC CCTTCGCCGC CGAAGATCAT TACACGACCA AATATATCGA TTGCGCCGTG GAGCCGCAGT TTCCGTTCGG CCATGGCCTG TCCTACAGCC CGTTTTCGCT CGAAGAATTC GCTGCCGGCC GGCAGAGTTT CTGCGCGCGC GACACGCTCG ACTTTTCGGT CGAGGTCCAC AATCTTGGAC CGCTCGACGG CGAGGCGACC GTGTTCCTCT TTGCGCGCGA TCTCGTCGCC TCGGTGGCGC GGCCGGTGCT CGAACTGAAG CGCTTCGGCA AAATCGCCTT GCCGGCGGGC GAGAGCGGCA CATTACGCTT CGCGCTTGCG GCAAGCGAAC TCGCCTTTCC CGGCGTCGAT TTTCGGCCCT GCTTCGAGCC CGGCGCTTTT GAATTTTCAG TTGGATTCGA TGCCGATCCA AGGCGGCACA GGAAGCTGAG CCTGCAGGCG ACGGCGCCTT AA
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Protein sequence | MALDLKTLLA DMTLEEKIGQ LTMTAGSYAV TGPIVGGDVE AAIRAGRIGS LLNLWGATEI AAIQKIAMEE SRLGIPLIVG FDVLHGHRMI FPLPLAEACA FDPALWRATA RAAAREAAAD GVSMVFAPML DVARDPRWGR IAEGAGEDPF VTCEFAKAKI AGFQGEDLAA PAAVAAVAKH FCAYGAAEGG RDYASADVSE RALHEVYLPP FAAAIEAGCA AIMPAFMDLA GVPMTAHQPL LRGWLREARG FEGVIVSDYN ALAELMRHGV AANLIEAAAL ALRAGVDIDM MSSAYADGLP QALARGLVTE EDIDACVHRV LELKQKLGLF DGVLRGARRQ GRDSAEPALA RDAARRSIVL LTNHGALPLS PSLRKIALIG PLSEAAGEMD GSWAAAGDRN AAVSILDGLT AALPTTEMFC AAGVAVDYGN AAGIADAMAL CEEAELIILC LGESAEMSGE AASRADLGLP GRQRELAEAA LGLGQKLGRP VVALLSSGRP LTLPWLFERA DAVAATWFLG AEAGHAIADV LTGQFNPVGR LALSWPRAVG QIPLFYAARP TGRPFAAEDH YTTKYIDCAV EPQFPFGHGL SYSPFSLEEF AAGRQSFCAR DTLDFSVEVH NLGPLDGEAT VFLFARDLVA SVARPVLELK RFGKIALPAG ESGTLRFALA ASELAFPGVD FRPCFEPGAF EFSVGFDADP RRHRKLSLQA TAP
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